RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	DSG1	Q02413	1049 aa		26.46	■■□□□ 1.83
CNOT7-204	ENST00000518885	CBX2	Q14781	532 aa	Predicted RBP	26.46	■■□□□ 1.83
CNOT7-204	ENST00000518885	ATL3	Q6DD88	541 aa		26.46	■■□□□ 1.83
CNOT7-204	ENST00000518885	PDXDC1	Q6P996	788 aa		26.46	■■□□□ 1.83
CNOT7-204	ENST00000518885	RNF168	Q8IYW5	571 aa	Predicted RBP	26.46	■■□□□ 1.83
CNOT7-204	ENST00000518885	CLIC6	Q96NY7	704 aa		26.46	■■□□□ 1.83
CNOT7-204	ENST00000518885	CASTOR2	A6NHX0	329 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	SPTLC2	O15270	562 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	YEATS4	O95619	227 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	C1R	P00736	705 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	CNP	P09543	421 aa	Known RBP	26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	HARS	P12081	509 aa	Known RBP	26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	STAT6	P42226	847 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	LIG4	P49917	911 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	LINC00301	Q8NCQ3	95 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	SUSD6	Q92537	303 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	S1PR5	Q9H228	398 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	ADAM7	Q9H2U9	754 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	CHST7	Q9NS84	486 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	TBX20	Q9UMR3	447 aa		26.45	■■□□□ 1.82
CNOT7-204	ENST00000518885	MYH11	P35749	1972 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	HNRNPDL	O14979	420 aa	Known RBP	26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	TRAPPC3	O43617	180 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	LILRB3	O75022	631 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	EFEMP2	O95967	443 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	MTHFR	P42898	656 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	OSTN	P61366	133 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	MCL1	Q07820	350 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	KIAA0319	Q5VV43	1072 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	SYCE2	Q6PIF2	218 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	USP49	Q70CQ1	688 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	SLC22A17	Q8WUG5	538 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	DDX27	Q96GQ7	796 aa	Known RBP	26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	PPP1R10	Q96QC0	940 aa	Known RBP	26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	LRRC27	Q9C0I9	530 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	SFXN1	Q9H9B4	322 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	RXFP1	Q9HBX9	757 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	SEL1L	Q9UBV2	794 aa		26.44	■■□□□ 1.82
CNOT7-204	ENST00000518885	SMIM28	A0A1B0GU29	152 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	GAP43	P17677	238 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	CLCN4	P51793	760 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	DCLRE1A	Q6PJP8	1040 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	KCNG4	Q8TDN1	519 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	SNX27	Q96L92	541 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	FBXL18	Q96ME1	805 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	FNIP2	Q9P278	1114 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	CFAP45	Q9UL16	551 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	NR2E1	Q9Y466	385 aa		26.43	■■□□□ 1.82
CNOT7-204	ENST00000518885	PI4K2B	G5E9Z4	385 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	TMEM189-UBE2V1	I3L0A0	370 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	KIF4A	O95239	1232 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	GLUD1	P00367	558 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	F13A1	P00488	732 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	EPCAM	P16422	314 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	NAB2	Q15742	525 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	XKR4	Q5GH76	650 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	ATAT1	Q5SQI0	421 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	TAS1R1	Q7RTX1	841 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	CEP120	Q8N960	986 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	LRRC15	Q8TF66	581 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	TTPAL	Q9BTX7	342 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	GPR62	Q9BZJ7	368 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	CD320	Q9NPF0	282 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	CNTN3	Q9P232	1028 aa		26.42	■■□□□ 1.82
CNOT7-204	ENST00000518885	ABLIM1	O14639	778 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	B3GAT3	O94766	335 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	PIGR	P01833	764 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	CLTA	P09496	248 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	KCNE1	P15382	129 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	GLRA4	Q5JXX5	417 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	ALKAL1	Q6UXT8	129 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	HDAC7	Q8WUI4	952 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	RIN2	Q8WYP3	895 aa	Predicted RBP	26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	DDX12P	Q92771	950 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	HVCN1	Q96D96	273 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	APOL5	Q9BWW9	433 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	CUEDC2	Q9H467	287 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	ST6GALNAC4	Q9H4F1	302 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	PLEKHA5	Q9HAU0	1116 aa		26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885	TFIP11	Q9UBB9	837 aa	Known RBP	26.41	■■□□□ 1.82
CNOT7-204	ENST00000518885		F8W810	466 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	TEX28	O15482	410 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	DCX	O43602	365 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	CUTA	O60888	179 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	GTF2B	Q00403	316 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	RARS2	Q5T160	578 aa	Known RBP	26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	FAM171A1	Q5VUB5	890 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	FOXD4L5	Q5VV16	416 aa	Predicted RBP	26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	DYM	Q7RTS9	669 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	RABGGTA	Q92696	567 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	ZBTB45	Q96K62	511 aa	Predicted RBP	26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	TSPAN18	Q96SJ8	248 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	PAAF1	Q9BRP4	392 aa		26.4	■■□□□ 1.82
CNOT7-204	ENST00000518885	LOC730098	B7Z3J9	87 aa		26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	RPL9	P32969	192 aa	Known RBP	26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	CYP26C1	Q6V0L0	522 aa		26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	CEP57	Q86XR8	500 aa		26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	MAP4K3	Q8IVH8	894 aa		26.39	■■□□□ 1.82

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms