RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 EXTL1Q92935 676 aa4.98□□□□□ -1.61
PABPC1-206ENST00000518293 CDC5LQ99459 802 aaKnown RBP4.98□□□□□ -1.61
PABPC1-206ENST00000518293 SMAD5Q99717 465 aaKnown RBP4.98□□□□□ -1.61
PABPC1-206ENST00000518293 LSM14BQ9BX40 385 aaKnown RBP4.98□□□□□ -1.61
PABPC1-206ENST00000518293 C11orf21Q9P2W6 132 aa4.98□□□□□ -1.61
PABPC1-206ENST00000518293 RIMS1Q86UR5 1692 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 CTTNBP2Q8WZ74 1663 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 NEO1Q92859 1461 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 RAPGEF2Q9Y4G8 1499 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 XPOTO43592 962 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 MFAP3LO75121 409 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 NDUFS2O75306 463 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 NCLP19338 710 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 SCNN1GP51170 649 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 KRT85P78386 507 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 PURAQ00577 322 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 RRP1BQ14684 758 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 NOMO1Q15155 1222 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 MFSD14BQ5SR56 506 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 APBB1IPQ7Z5R6 666 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 XYLT1Q86Y38 959 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 C1orf210Q8IVY1 113 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 GSPT2Q8IYD1 628 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 TRMT2AQ8IZ69 625 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 THEMISQ8N1K5 641 aaPredicted RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 OR7D4Q8NG98 312 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 ST8SIA2Q92186 375 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 DPF2Q92785 391 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 CHFRQ96EP1 664 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 CEP95Q96GE4 821 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 TEKT5Q96M29 485 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 ADI1Q9BV57 179 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 SLC13A1Q9BZW2 595 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 EPC1Q9H2F5 836 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 BCO1Q9HAY6 547 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 DDX56Q9NY93 547 aaKnown RBP4.97□□□□□ -1.61
PABPC1-206ENST00000518293 ZBTB21Q9ULJ3 1066 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 DNM3Q9UQ16 869 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 SIK3Q9Y2K2 1263 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 MADDQ8WXG6 1647 aa4.97□□□□□ -1.61
PABPC1-206ENST00000518293 SPATA31D1Q6ZQQ2 1576 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 CFAP74Q9C0B2 1584 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 FANCAO15360 1455 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 ACRV1P26436 265 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 ECHS1P30084 290 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 SREBF1P36956 1147 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 SLC6A9P48067 706 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 EXOSC10Q01780 885 aaKnown RBP4.96□□□□□ -1.62
PABPC1-206ENST00000518293 MGAT2Q10469 447 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 CSRP2Q16527 193 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 SMN1Q16637 294 aaKnown RBP4.96□□□□□ -1.62
PABPC1-206ENST00000518293 ANKS6Q68DC2 871 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 FAM180AQ6UWF9 173 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 MB21D1Q8N884 522 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 FBXO18Q8NFZ0 1043 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.96□□□□□ -1.622e-71■■□□□ 14
PABPC1-206ENST00000518293 IL17DQ8TAD2 202 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 NRG4Q8WWG1 115 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 ATXN2LQ8WWM7 1075 aaKnown RBP4.96□□□□□ -1.62
PABPC1-206ENST00000518293 MNTQ99583 582 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 CPPED1Q9BRF8 314 aaPredicted RBP4.96□□□□□ -1.62
PABPC1-206ENST00000518293 CPEB1Q9BZB8 566 aaKnown RBP4.96□□□□□ -1.62
PABPC1-206ENST00000518293 KCNH6Q9H252 994 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 INTUQ9ULD6 942 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 GIT1Q9Y2X7 761 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 SPEF1Q9Y4P9 236 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 XDHP47989 1333 aa4.96□□□□□ -1.62
PABPC1-206ENST00000518293 ATRNL1Q5VV63 1379 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 ABCA9Q8IUA7 1624 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 KLRG2A4D1S0 409 aaPredicted RBP4.95□□□□□ -1.62
PABPC1-206ENST00000518293 CYP27B1O15528 508 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 NARSO43776 548 aaKnown RBP4.95□□□□□ -1.62
PABPC1-206ENST00000518293 IPO13O94829 963 aaKnown RBP4.95□□□□□ -1.62
PABPC1-206ENST00000518293 GNAT2P19087 354 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 HK1P19367 917 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 PTPN7P35236 360 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 WASP42768 502 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 INHBEP58166 350 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 DGCR2P98153 550 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 IGFL4Q6B9Z1 124 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 HTR3DQ70Z44 454 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 DOK3Q7L591 496 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 GPRIN1Q7Z2K8 1008 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 ZNF572Q7Z3I7 529 aaPredicted RBP4.95□□□□□ -1.62
PABPC1-206ENST00000518293 FAM83AQ86UY5 434 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 PNMA8AQ86V59 439 aaPredicted RBP4.95□□□□□ -1.62
PABPC1-206ENST00000518293 PQLC1Q8N2U9 271 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 AMER2Q8N7J2 671 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.95□□□□□ -1.62
PABPC1-206ENST00000518293 OR52N2Q8NGI0 321 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 SLC35B2Q8TB61 432 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 STON2Q8WXE9 905 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 PGBD4Q96DM1 585 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 PLEKHG4BQ96PX9 1271 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 PDCD2LQ9BRP1 358 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 GPR87Q9BY21 358 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 LDAHQ9H6V9 325 aa4.95□□□□□ -1.62
PABPC1-206ENST00000518293 TYW1Q9NV66 732 aaKnown RBP4.95□□□□□ -1.62
PABPC1-206ENST00000518293 MRFAP1Q9Y605 127 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms