RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 DIEXFQ68CQ4 756 aaKnown RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 SULT6B1Q6IMI4 303 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CLEC18BQ6UXF7 455 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CCNI2Q6ZMN8 369 aaPredicted RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 ATG14Q6ZNE5 492 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 RAVER1Q8IY67 606 aaKnown RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CACTIN-AS1Q8N1I8 211 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 FAM26EQ8N5C1 309 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 PRPF38AQ8NAV1 312 aaKnown RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CLEC18CQ8NCF0 446 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 ST13P5Q8NFI4 369 aaPredicted RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 WDR89Q96FK6 387 aaPredicted RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 TM9SF2Q99805 663 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 IER2Q9BTL4 223 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 SMOC1Q9H4F8 434 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CD209Q9NNX6 404 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 SLC5A4Q9NY91 659 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 NRBP1Q9UHY1 535 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 CDH22Q9UJ99 828 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 RRP7AQ9Y3A4 280 aaKnown RBP4.05□□□□□ -1.76
CPNE3-204ENST00000517862 COL6A5A8TX70 2615 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 DENND4AQ7Z401 1863 aa4.05□□□□□ -1.76
CPNE3-204ENST00000517862 MUC22E2RYF6 1773 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ATG2BQ96BY7 2078 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ROBO3Q96MS0 1386 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ABHD14A-ACY1A0A1B0GW23 586 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 SLC22A31A6NKX4 558 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 H3BRJ5 948 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 GFRA2O00451 464 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 SIX3O95343 332 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 MMP1P03956 469 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 RB1P06400 928 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 SUPT20HL2P0C7V6 817 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 MYCLP1P12525 358 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 DRD2P14416 443 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 MYL6BP14649 208 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 NME1P15531 152 aaKnown RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 LIG1P18858 919 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 TECP42680 631 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 FKBP1AP62942 108 aaKnown RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 HTRA4P83105 476 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 CYP4F3Q08477 520 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 AP3B2Q13367 1082 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 TAF7LQ5H9L4 462 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 TDRD10Q5VZ19 366 aaKnown RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 EEPD1Q7L9B9 569 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 NLRC3Q7RTR2 1065 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 FERMT3Q86UX7 667 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ZSWIM2Q8NEG5 633 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 KLHL6Q8WZ60 621 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ELMO3Q96BJ8 720 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ATG4CQ96DT6 458 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 MED8Q96G25 268 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 NECTIN4Q96NY8 510 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 KLHL5Q96PQ7 755 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 YME1L1Q96TA2 773 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 SPATA9Q9BWV2 254 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 LGR4Q9BXB1 951 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 SLC32A1Q9H598 525 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ZCCHC4Q9H5U6 513 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 TLE6Q9H808 572 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 CYP26B1Q9NR63 512 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 USP40Q9NVE5 1235 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 GMIPQ9P107 970 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 GABBR1Q9UBS5 961 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 LRRFIP2Q9Y608 721 aaKnown RBP4.04□□□□□ -1.76
CPNE3-204ENST00000517862 TGP01266 2768 aa4.04□□□□□ -1.76
CPNE3-204ENST00000517862 ZNFX1Q9P2E3 1918 aaKnown RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 FRMPD2Q68DX3 1309 aaPredicted RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CHURC1-FNTBB4DL54 471 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 C5orf67F2Z3F1 127 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 PER2O15055 1255 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 AKAP8O43823 692 aaKnown RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 ZNF862O60290 1169 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 SYNCRIPO60506 623 aaKnown RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 SRGAP2BP0DMP2 458 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 MAOBP27338 520 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 HOXA7P31268 230 aaPredicted RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 TCP10Q12799 353 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 NFATC3Q12968 1075 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 SRSF5Q13243 272 aaKnown RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CAMK1Q14012 370 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 SETDB1Q15047 1291 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CCDC152Q4G0S7 254 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 TM4SF20Q53R12 229 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 FKBP1CQ5VVH2 108 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 YOD1Q5VVQ6 348 aaPredicted RBP4.03□□□□□ -1.76
CPNE3-204ENST00000517862 HIST2H2BDQ6DRA6 164 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 TCEAL6Q6IPX3 200 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CES5AQ6NT32 575 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 ANKRD54Q6NXT1 300 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CNKSR3Q6P9H4 555 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 DCLRE1AQ6PJP8 1040 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CXCL17Q6UXB2 119 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 CEP68Q76N32 757 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 C12orf40Q86WS4 652 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 THNSL2Q86YJ6 484 aa4.03□□□□□ -1.76
CPNE3-204ENST00000517862 ANKRD18AQ8IVF6 992 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms