RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 HASPINQ8TF76 798 aa16.09■□□□□ 0.17
SCARNA20.5-201ENST00000516991 RSAD2Q8WXG1 361 aa16.09■□□□□ 0.17
SCARNA20.5-201ENST00000516991 NKD2Q969F2 451 aaPredicted RBP16.09■□□□□ 0.17
SCARNA20.5-201ENST00000516991 RAB34Q9BZG1 259 aa16.09■□□□□ 0.17
SCARNA20.5-201ENST00000516991 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
SCARNA20.5-201ENST00000516991 VWA8A3KMH1 1905 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TTLL13PA6NNM8 815 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ANHXE9PGG2 379 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 XYLBO75191 536 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 POU2F2P09086 479 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 LIG1P18858 919 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 FSHRP23945 695 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 HTR4Q13639 388 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 NAB2Q15742 525 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PPM1LQ5SGD2 360 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ATF7IP2Q5U623 682 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 RTL10Q7L3V2 364 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ASCL5Q7RTU5 278 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CEP57Q86XR8 500 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 FBXO18Q8NFZ0 1043 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 LNX1Q8TBB1 728 aaPredicted RBP16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ZSCAN31Q96LW9 406 aaPredicted RBP16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 UROC1Q96N76 676 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CLSTN3Q9BQT9 956 aa16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SH2B1Q9NRF2 756 aaPredicted RBP16.08■□□□□ 0.16
SCARNA20.5-201ENST00000516991 KRBA1A5PL33 1030 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 STK25O00506 426 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PI15O43692 258 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 C8AP07357 584 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ANGPT1Q15389 498 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 EEF1DP3Q658K8 133 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PHLDB3Q6NSJ2 640 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 FRMD5Q7Z6J6 570 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 BHMT2Q9H2M3 363 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TBC1D17Q9HA65 648 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ARHGEF3Q9NR81 526 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SLC2A4RGQ9NR83 387 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 LRWD1Q9UFC0 647 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CDH7Q9ULB5 785 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 GDAQ9Y2T3 454 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CFAP54Q96N23 3096 aa16.07■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TRAPPC3O43617 180 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 EDN1P05305 212 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 FGFR3P22607 806 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 RAB33AQ14088 237 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PDIA5Q14554 519 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 MTSS1LQ765P7 747 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 GRASPQ7Z6J2 395 aaPredicted RBP16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SNX29Q8TEQ0 813 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PPP1R10Q96QC0 940 aaKnown RBP16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 KIFC3Q9BVG8 833 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CCDC94Q9BW85 323 aaPredicted RBP16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TOPORSQ9NS56 1045 aaPredicted RBP16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 MTRRQ9UBK8 725 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TNFSF13BQ9Y275 285 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 NUMBLQ9Y6R0 609 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 DOCK6Q96HP0 2047 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TRIP11Q15643 1979 aa16.06■□□□□ 0.16
SCARNA20.5-201ENST00000516991 GVINP1Q7Z2Y8 2422 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 K7ERI5 159 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 LAD1O00515 517 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 B3GAT3O94766 335 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 YARSP54577 528 aaKnown RBP16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 UVSSAQ2YD98 709 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ANKS3Q6ZW76 656 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 GPR152Q8TDT2 470 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 DDX19AQ9NUU7 478 aaKnown RBP16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SLC38A7Q9NVC3 462 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 KIAA1024Q9UPX6 916 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 MYH15Q9Y2K3 1946 aa16.05■□□□□ 0.16
SCARNA20.5-201ENST00000516991 GRM5P41594 1212 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 DMP1Q13316 513 aaPredicted RBP16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ZNF568Q3ZCX4 644 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 GLRA4Q5JXX5 417 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 AXDND1Q5T1B0 1012 aaPredicted RBP16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 C4orf32Q8N8J7 132 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 IGSF22Q8N9C0 903 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SHDQ96IW2 340 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 MRPL4Q9BYD3 311 aaKnown RBP16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SEMA4AQ9H3S1 761 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TMEM134Q9H6X4 195 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 KCNH3Q9ULD8 1083 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 DNM3Q9UQ16 869 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 BACE2Q9Y5Z0 518 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CITO14578 2027 aa16.04■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SPTBN4Q9H254 2564 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CCDC169A6NNP5 214 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CCL16O15467 120 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ADAM12O43184 909 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 OR1D2P34982 312 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms