RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 IGSF9Q9P2J2 1179 aa9.17□□□□□ -0.94
SCARNA20.3-201ENST00000516913 DNMT3BQ9UBC3 853 aaKnown RBP9.17□□□□□ -0.94
SCARNA20.3-201ENST00000516913 PARP2Q9UGN5 583 aa9.17□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CACNA1BQ00975 2339 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 LRRIQ4A6NIV6 560 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 MOSPD3O75425 235 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 ERLIN2O94905 339 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SRFP11831 508 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CYP11B2P19099 503 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 FGFR3P22607 806 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 TKTP29401 623 aaKnown RBP9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CDC25AP30304 524 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 MCM7P33993 719 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CCR2P41597 374 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 GRIK3Q13003 919 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 MAPK7Q13164 816 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 TUSC3Q13454 348 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SPECC1Q5M775 1068 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 ALKAL1Q6UXT8 129 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SUMF1Q8NBK3 374 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CNNM3Q8NE01 707 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 RSPH1Q8WYR4 309 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 FGF13Q92913 245 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 NKD2Q969F2 451 aaPredicted RBP9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 TCEAL4Q96EI5 215 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 ZBTB45Q96K62 511 aaPredicted RBP9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 MMTAG2Q9BU76 263 aaKnown RBP9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 COLEC11Q9BWP8 271 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 HAPLN2Q9GZV7 340 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 MFSD1Q9H3U5 465 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 UBN1Q9NPG3 1134 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SLC2A4RGQ9NR83 387 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 GDAQ9Y2T3 454 aa9.16□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CNOT1A5YKK6 2376 aaKnown RBP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 MED19A0JLT2 244 aaPredicted RBP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 ACKR2O00590 384 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 NEMFO60524 1076 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 TADA2AO75478 443 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SEC24AO95486 1093 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CENPBP07199 599 aaPredicted RBP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SP9P0CG40 484 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 XRCC6P12956 609 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 TGM1P22735 817 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 FCARP24071 287 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 OR1D2P34982 312 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 CLCNKBP51801 687 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SNW1Q13573 536 aaKnown RBP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 RAB33AQ14088 237 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 PSMD5Q16401 504 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 XKR4Q5GH76 650 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 NPAS3Q8IXF0 933 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 GPR65Q8IYL9 337 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 TMEM87AQ8NBN3 555 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 HDAC7Q8WUI4 952 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 ING5Q8WYH8 240 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 C18orf25Q96B23 403 aaPredicted RBP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 RSPRY1Q96DX4 576 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 ZSWIM3Q96MP5 696 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 KXD1Q9BQD3 176 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 TTPALQ9BTX7 342 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 POLR3CQ9BUI4 534 aaPredicted RBP9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 PLEKHA4Q9H4M7 779 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 ARHGEF3Q9NR81 526 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 FBXL21Q9UKT6 434 aa9.15□□□□□ -0.94
SCARNA20.3-201ENST00000516913 SMIM28A0A1B0GU29 152 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 E9PMD0 336 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 DKC1O60832 514 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CDKL5O76039 1030 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 PRKCBP05771 671 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 C8AP07357 584 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CEBPBP17676 345 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 LIG1P18858 919 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 FSHRP23945 695 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 NEK4P51957 841 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 STARD6P59095 220 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TFDP1Q14186 410 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 PCBP1Q15365 356 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 UPP1Q16831 310 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SEZ6Q53EL9 994 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SCARA3Q6AZY7 606 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TANGO2Q6ICL3 276 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 PHLDB3Q6NSJ2 640 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CPLX2Q6PUV4 134 aaKnown RBP9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CEP57Q86XR8 500 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SLC7A14Q8TBB6 771 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 LRRC3BQ96PB8 259 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 RTP3Q9BQQ7 232 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CRISPLD1Q9H336 500 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 C2orf42Q9NWW7 574 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ZDHHC7Q9NXF8 308 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MTRRQ9UBK8 725 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CDH7Q9ULB5 785 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SDK1Q7Z5N4 2213 aa9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MAP1BP46821 2468 aaKnown RBP9.14□□□□□ -0.95
SCARNA20.3-201ENST00000516913 WDR27A2RRH5 827 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms