RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 IRF9Q00978 393 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 TRIM61Q5EBN2 209 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 LPPQ93052 612 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 RPL10LQ96L21 214 aaKnown RBP7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 GPHA2Q96T91 129 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 FOXB1Q99853 325 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 SLC6A15Q9H2J7 730 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 RWDD1Q9H446 243 aaPredicted RBP7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 CHPF2Q9P2E5 772 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 USP35Q9P2H5 1018 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 DBF4Q9UBU7 674 aaPredicted RBP7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 SFMBT1Q9UHJ3 866 aa7.11□□□□□ -1.27
RN7SKP253-201ENST00000516424 SPATA31A6Q5VVP1 1343 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 EXOC5O00471 708 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 SNRPA1P09661 255 aaKnown RBP7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 CCT4P50991 539 aaKnown RBP7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 RASA3Q14644 834 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 TMEM177Q53S58 311 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 GAREM2Q75VX8 874 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 LRP10Q7Z4F1 713 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 UNC5CLQ8IV45 518 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 DNAJC10Q8IXB1 793 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 SMC5Q8IY18 1101 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 IGSF22Q8N9C0 903 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 MIEF2Q96C03 454 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 SLC7A6OSQ96CW6 309 aaPredicted RBP7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 ZG16BQ96DA0 208 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 DDX21Q9NR30 783 aaKnown RBP eCLIP7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 SAE1Q9UBE0 346 aaPredicted RBP7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 RBM8AQ9Y5S9 174 aaKnown RBP7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 BCL9LQ86UU0 1499 aa7.1□□□□□ -1.27
RN7SKP253-201ENST00000516424 ITGB4P16144 1822 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 TCRBV16S1A1N1A0A5B0 115 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 FAM221BA6H8Z2 402 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 C2orf78A6NCI8 922 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 RAMP2O60895 175 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 H2AFYO75367 372 aaKnown RBP7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 PEX11BO96011 259 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 APPP05067 770 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 ZBTB48P10074 688 aaPredicted RBP7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 ADAM8P78325 824 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 VPS72Q15906 364 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 PROSER3Q2NL68 480 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 ZC3H12BQ5HYM0 836 aaKnown RBP7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 BRAPQ7Z569 592 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 FGD2Q7Z6J4 655 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 ULK2Q8IYT8 1036 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 C2orf69Q8N8R5 385 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 ANKRD53Q8N9V6 530 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 PIGBQ92521 554 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 GCDHQ92947 438 aaPredicted RBP7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 PRRX2Q99811 253 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 TTPALQ9BTX7 342 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 HYPKQ9NX55 129 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 GPRC5BQ9NZH0 403 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 DENND2AQ9ULE3 1009 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 USP16Q9Y5T5 823 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 UBR2Q8IWV8 1755 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 TOGARAM1Q9Y4F4 1720 aa7.09□□□□□ -1.27
RN7SKP253-201ENST00000516424 TNS2Q63HR2 1409 aa7.09□□□□□ -1.28
RN7SKP253-201ENST00000516424 WNK3Q9BYP7 1800 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 N4BP2Q86UW6 1770 aaPredicted RBP7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 PI4KAP2A4QPH2 592 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 RPS6KA4O75676 772 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 ANXA1P04083 346 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 HSPA1LP34931 641 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 RBM25P49756 843 aaKnown RBP7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 RGS3P49796 1198 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 SESN2P58004 480 aaPredicted RBP7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 ANTXR2P58335 489 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 BPIFB4P59827 614 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 SERINC3Q13530 473 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 TOB2Q14106 344 aaPredicted RBP7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 NAALADL2Q58DX5 795 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 KSR2Q6VAB6 950 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 SKAP1Q86WV1 359 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 TTC5Q8N0Z6 440 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 PI4KAP1Q8N8J0 262 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 GFM2Q969S9 779 aaKnown RBP7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 MEIS3Q99687 375 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 USP44Q9H0E7 712 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 CCDC9Q9Y3X0 531 aaKnown RBP7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 C5P01031 1676 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 LRP6O75581 1613 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 PAPPAQ13219 1627 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 GLI3P10071 1580 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 ADCY9O60503 1353 aa7.08□□□□□ -1.28
RN7SKP253-201ENST00000516424 KCPQ6ZWJ8 1503 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 PCSK5Q92824 1860 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 PXDNLA1KZ92 1463 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 PRLP01236 227 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 MAN2A2P49641 1150 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 SLC6A3Q01959 620 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 TCIRG1Q13488 830 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 ELAVL1Q15717 326 aaKnown RBP7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 BEND3Q5T5X7 828 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 CC2D1AQ6P1N0 951 aaPredicted RBP7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 FAM111BQ6SJ93 734 aa7.07□□□□□ -1.28
RN7SKP253-201ENST00000516424 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms