RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 ADCY6O43306 1168 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 CDKL5O76039 1030 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 SPDEFO95238 335 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 ESRRBO95718 433 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 EGR2P11161 476 aaPredicted RBP4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 ALOX15P16050 662 aaPredicted RBP4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 CD38P28907 300 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 MRPS21P82921 87 aaKnown RBP4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 KRTAP1-1Q07627 177 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 TP53BP2Q13625 1128 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 ADRM1Q16186 407 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 MUM1Q2TAK8 710 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 ANO4Q32M45 955 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 MUM1L1Q5H9M0 696 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 REPS2Q8NFH8 660 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 OR56A1Q8NGH5 318 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 TSPEARQ8WU66 669 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 PHACTR3Q96KR7 559 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 UHRF1Q96T88 793 aaPredicted RBP4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 NEU1Q99519 415 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 IFT122Q9HBG6 1241 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 RBM12Q9NTZ6 932 aaKnown RBP4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 KLHL11Q9NVR0 708 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 FAM30AQ9NZY2 134 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 ZBTB21Q9ULJ3 1066 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 MAP3K2Q9Y2U5 619 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 TBX22Q9Y458 520 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 INSL6Q9Y581 213 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 NOX1Q9Y5S8 564 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 ATRNL1Q5VV63 1379 aa4.12□□□□□ -1.75
RNU4-49P-201ENST00000516080 TYRP1P17643 537 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 CXCR5P32302 372 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 PER3P56645 1201 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 FOXI1Q12951 378 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 MPP3Q13368 585 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 PRR16Q569H4 304 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 TSHZ3Q63HK5 1081 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 SYCE2Q6PIF2 218 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 Q6ZVL8 140 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 MED25Q71SY5 747 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 MAPKAPK5Q8IW41 473 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 PQLC1Q8N2U9 271 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 CHAC2Q8WUX2 184 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 LMBR1Q8WVP7 490 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 ASB10Q8WXI3 467 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 NELL1Q92832 810 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 FUBP3Q96I24 572 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 BBC3Q96PG8 261 aaPredicted RBP4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 ORAI2Q96SN7 254 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 MRI1Q9BV20 369 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 ACE2Q9BYF1 805 aaPredicted RBP4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 QRSL1Q9H0R6 528 aaKnown RBP4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 RNPEPQ9H4A4 650 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 SCOCQ9UIL1 159 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 MAST3O60307 1309 aa4.11□□□□□ -1.75
RNU4-49P-201ENST00000516080 ARHGEF17Q96PE2 2063 aaPredicted RBP4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 A0A1B0GTW7 788 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 MASP2O00187 686 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 TEX33O43247 280 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 ENDOD1O94919 500 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 POMCP01189 267 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 ITGAMP11215 1152 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 CPEP16870 476 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 ATP5JP18859 108 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 FDXRP22570 491 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 SREBF1P36956 1147 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 CLK3P49761 638 aaKnown RBP4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 RAP2BP61225 183 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 CCT2P78371 535 aaKnown RBP4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 MALLQ13021 153 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 AFMIDQ63HM1 303 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 KCNK18Q7Z418 384 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 STRA8Q7Z7C7 330 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 FAM43AQ8N2R8 423 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 TMEM132CQ8N3T6 1108 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 UBR7Q8N806 425 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 TGFBRAP1Q8WUH2 860 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 BOD1Q96IK1 185 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 ADI1Q9BV57 179 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 LANCL2Q9NS86 450 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 COX11Q9Y6N1 276 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 PNPLA7Q6ZV29 1317 aa4.1□□□□□ -1.75
RNU4-49P-201ENST00000516080 RAP2AP10114 183 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 GUCY1A2P33402 732 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 MPLP40238 635 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 SLC5A3P53794 718 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 ELLP55199 621 aaPredicted RBP4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 SCAND1P57086 179 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 C21orf58P58505 322 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 CT47A1Q5JQC4 288 aaPredicted RBP4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 OTUD7BQ6GQQ9 843 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 RD3Q7Z3Z2 195 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 CAGE1Q8TC20 777 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 CASKIN2Q8WXE0 1202 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 HOXB13Q92826 284 aaPredicted RBP4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 FUBP1Q96AE4 644 aaKnown RBP4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 CYFIP2Q96F07 1278 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 ALOXE3Q9BYJ1 711 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 KRTAP9-8Q9BYQ0 159 aa4.09□□□□□ -1.75
RNU4-49P-201ENST00000516080 SENP6Q9GZR1 1112 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms