RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 NOP9Q86U38 636 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 BRSK2Q8IWQ3 736 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 RPUSD2Q8IZ73 545 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 LINC01465Q8N7H1 131 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 CAGE1Q8TC20 777 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 C1orf112Q9NSG2 853 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 COL1A2P08123 1366 aa16.65■□□□□ 0.26
THUMPD3-210ENST00000515662 NCANO14594 1321 aa16.64■□□□□ 0.26
THUMPD3-210ENST00000515662 ACKR2O00590 384 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 VNN1O95497 513 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 PROZP22891 400 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 TNFSF9P41273 254 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 PIK3CAP42336 1068 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 CLCN6P51797 869 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 MBTD1Q05BQ5 628 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 BIRC3Q13489 604 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 SLC47A2Q86VL8 602 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 LRRC57Q8N9N7 239 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 OR6J1Q8NGC5 347 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 TPCN2Q8NHX9 752 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 PSMB7Q99436 277 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 H3BRB1 525 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 INO80B-WBP1J3KQ70 363 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 OGTO15294 1046 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 MMP3P08254 477 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 CHRNB2P17787 502 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 CXCR5P32302 372 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 MAP2K5Q13163 448 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 TAF1CQ15572 869 aaPredicted RBP16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 WDR44Q5JSH3 913 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 DHX38Q92620 1227 aaKnown RBP16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 FAM81BQ96LP2 452 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 INO80BQ9C086 356 aaPredicted RBP16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 TUT1Q9H6E5 874 aaKnown RBP16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 MINDY3Q9H8M7 445 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 PTPRHQ9HD43 1115 aa16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 ARGLU1Q9NWB6 273 aaPredicted RBP16.64■□□□□ 0.25
THUMPD3-210ENST00000515662 ADCY6O43306 1168 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 GRM1Q13255 1194 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 ZNF572Q7Z3I7 529 aaPredicted RBP16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 SAPCD2Q86UD0 394 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 OR5B17Q8NGF7 314 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 ACP6Q9NPH0 428 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 B4GALT5O43286 388 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 CYP11B1P15538 503 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 POU5F1BQ06416 359 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 ATF7IP2Q5U623 682 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 MPZL3Q6UWV2 235 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 CTNNBL1Q8WYA6 563 aaPredicted RBP16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 PCDHB18PQ96TA0 734 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 IFT122Q9HBG6 1241 aa16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 CPSF3Q9UKF6 684 aaKnown RBP16.63■□□□□ 0.25
THUMPD3-210ENST00000515662 ANKRD62A6NC57 917 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 IQCF3P0C7M6 154 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 ABCB4P21439 1286 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 PHKA2P46019 1235 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 TNFAIP2Q03169 654 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 DGKDQ16760 1214 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 TAF3Q5VWG9 929 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 SLFN11Q7Z7L1 901 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 LMBR1Q8WVP7 490 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 RFFLQ8WZ73 363 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 ISCUQ9H1K1 167 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 FTLP02792 175 aaPredicted RBP16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 RHOXF2BP0C7M4 288 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 WDR49Q8IV35 697 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 SLC35G2Q8TBE7 412 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 ARHGEF26Q96DR7 871 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 PNKPQ96T60 521 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 RHOXF2Q9BQY4 288 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 THAP2Q9H0W7 228 aa16.62■□□□□ 0.25
THUMPD3-210ENST00000515662 MMEP08473 750 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 HOXC6P09630 235 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 AP3M2P53677 418 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 FMO1Q01740 532 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 CDR2Q01850 454 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 ZNF568Q3ZCX4 644 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 PRAMEF19Q5SWL8 479 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 EEF1DP3Q658K8 133 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 SPOPLQ6IQ16 392 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 C17orf99Q6UX52 265 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 IFNL1Q8IU54 200 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 GOLPH3Q9H4A6 298 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 APOBEC3GQ9HC16 384 aaKnown RBP16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 PRMT7Q9NVM4 692 aaPredicted RBP16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 FLRT1Q9NZU1 646 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 RAB21Q9UL25 225 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 PACSIN2Q9UNF0 486 aaPredicted RBP16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 AKT3Q9Y243 479 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 TNFSF13BQ9Y275 285 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
THUMPD3-210ENST00000515662 RTN2O75298 545 aa16.6■□□□□ 0.25
THUMPD3-210ENST00000515662 GZMAP12544 262 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms