RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 CPB2Q96IY4 423 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 APOL6Q9BWW8 343 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 CSRNP2Q9H175 543 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
CSF1R-208ENST00000515239 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
CSF1R-208ENST00000515239 C2orf42Q9NWW7 574 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 GREB1Q4ZG55 1949 aa13.17□□□□□ -0.3
CSF1R-208ENST00000515239 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
CSF1R-208ENST00000515239 SLC27A2O14975 620 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 CEBPBP17676 345 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 AKAP5P24588 427 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 AXLP30530 894 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 OR1D2P34982 312 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 GRIK3Q13003 919 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 FAM78AQ5JUQ0 283 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 NOTUMQ6P988 496 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 CEP68Q76N32 757 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 C12orf50Q8NA57 414 aaPredicted RBP13.16□□□□□ -0.3
CSF1R-208ENST00000515239 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 HASPINQ8TF76 798 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
CSF1R-208ENST00000515239 IRF7Q92985 503 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 CCDC51Q96ER9 411 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 NXF3Q9H4D5 531 aaKnown RBP13.16□□□□□ -0.3
CSF1R-208ENST00000515239 PIAS3Q9Y6X2 628 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 COL4A2P08572 1712 aa13.16□□□□□ -0.3
CSF1R-208ENST00000515239 ZBTB43O43298 467 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 ERLIN2O94905 339 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 CCNE1P24864 410 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 HOXA6P31267 233 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 PTENP60484 403 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 PSMC5P62195 406 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 RING1Q06587 406 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 PTGDRQ13258 359 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSF1R-208ENST00000515239 WDR44Q5JSH3 913 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 PRSS36Q5K4E3 855 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 PSAPL1Q6NUJ1 521 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 SLC7A3Q8WY07 619 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 LOXL4Q96JB6 756 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 ZFP14Q9HCL3 533 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 KLK14Q9P0G3 267 aa13.15□□□□□ -0.3
CSF1R-208ENST00000515239 GIPC1O14908 333 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 ASAP2O43150 1006 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 PTPN2P17706 415 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 PSMC3P17980 439 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 SPINK2P20155 84 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 GNA11P29992 359 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 GDI1P31150 447 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 MLLT6P55198 1093 aaPredicted RBP13.14□□□□□ -0.31
CSF1R-208ENST00000515239 EXOSC10Q01780 885 aaKnown RBP13.14□□□□□ -0.31
CSF1R-208ENST00000515239 TUSC3Q13454 348 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 NECTIN1Q15223 517 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 AMHR2Q16671 573 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 Q4G0T1 1027 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 PLA2G2CQ5R387 149 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 WDR5BQ86VZ2 330 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 ZSWIM3Q96MP5 696 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 ASB16Q96NS5 453 aa13.14□□□□□ -0.31
CSF1R-208ENST00000515239 LSG1Q9H089 658 aaKnown RBP13.14□□□□□ -0.31
CSF1R-208ENST00000515239 RBM12Q9NTZ6 932 aaKnown RBP13.14□□□□□ -0.31
CSF1R-208ENST00000515239 TMEM8BA6NDV4 472 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 ARNTLO00327 626 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 EML1O00423 815 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 EPN2O95208 641 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 KIF4AO95239 1232 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 TOP3BO95985 862 aaKnown RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 ARF4P18085 180 aaPredicted RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 ADD1P35611 737 aaKnown RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 VITQ6UXI7 678 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 Q6ZS52 159 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 CDR2LQ86X02 465 aaPredicted RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 GATA6Q92908 595 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 CEP170P1Q96L14 293 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 TRIM6Q9C030 488 aaPredicted RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 SMOC1Q9H4F8 434 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
CSF1R-208ENST00000515239 PARP2Q9UGN5 583 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
CSF1R-208ENST00000515239 SETXQ7Z333 2677 aaKnown RBP13.12□□□□□ -0.31
CSF1R-208ENST00000515239 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 TICRRQ7Z2Z1 1910 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 ARHGEF37A1IGU5 675 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 WDR27A2RRH5 827 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 INO80B-WBP1J3KQ70 363 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 MICAL2O94851 1124 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 FGFR3P22607 806 aa13.12□□□□□ -0.31
CSF1R-208ENST00000515239 RFC5P40937 340 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms