RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SKIV2L2P42285 1042 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 ELF3P78545 371 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 RRP1BQ14684 758 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 VWA3BQ502W6 1294 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 KRT79Q5XKE5 535 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 OLFML2BQ68BL8 750 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 HIBCHQ6NVY1 386 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 NEK5Q6P3R8 708 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 FOXR2Q6PJQ5 311 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 DCAF4Q8WV16 495 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 RIN2Q8WYP3 895 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 PURBQ96QR8 312 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 LACRTQ9GZZ8 138 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 VPS33BQ9H267 617 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 VCXQ9H320 206 aa7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 NHEJ1Q9H9Q4 299 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-219ENST00000514743 DDHD2O94830 711 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 PLEKP08567 350 aaPredicted RBP7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 GSTT1P30711 240 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 MTIF2P46199 727 aaKnown RBP7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 COASYQ13057 564 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 LRRC41Q15345 812 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 TWF2Q6IBS0 349 aaKnown RBP7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 TMEM154Q6P9G4 183 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 TRAPPC11Q7Z392 1133 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 LENG9Q96B70 501 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 HIC2Q96JB3 615 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 GDAP1L1Q96MZ0 367 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 RAB34Q9BZG1 259 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 ABCG4Q9H172 646 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 PARVBQ9HBI1 364 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 XPO7Q9UIA9 1087 aaKnown RBP7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 EXOC7Q9UPT5 735 aa7.96□□□□□ -1.13
PDLIM5-219ENST00000514743 E9PMD0 336 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 ACSL4O60488 711 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SRGAP2O75044 1071 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 OXSR1O95747 527 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 TAL1P17542 331 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 TKTP29401 623 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 LRRC63Q05C16 580 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 TUBA3CQ13748 450 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 BCL2A1Q16548 175 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SGSM1Q2NKQ1 1148 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 CERKLQ49MI3 558 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 NAA35Q5VZE5 725 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 DGLUCYQ7Z3D6 616 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SESTD1Q86VW0 696 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SCAIQ8N9R8 606 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 ETNPPLQ8TBG4 499 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 ANO3Q9BYT9 981 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 NDST4Q9H3R1 872 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 HAUS4Q9H6D7 363 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 CREBZFQ9NS37 354 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PI4KBQ9UBF8 816 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 ACAD8Q9UKU7 415 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 RAB21Q9UL25 225 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 LOXHD1Q8IVV2 1947 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 GOLGA8IPA6NC78 632 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PAHP00439 452 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 RFX1P22670 979 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SP100P23497 879 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PCK1P35558 622 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 ADCY8P40145 1251 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 RFC5P40937 340 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 XRCC4Q13426 336 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 TUBB2AQ13885 445 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PPP1R7Q15435 360 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PCNX4Q63HM2 1172 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SLFN13Q68D06 897 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 ZNF449Q6P9G9 518 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 NOA1Q8NC60 698 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 GMCL1P1Q8NEA9 526 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 C7orf43Q8WVR3 580 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 HAUS1Q96CS2 278 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 NAF1Q96HR8 494 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 CAPZA3Q96KX2 299 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SMC6Q96SB8 1091 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SYT15Q9BQS2 421 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 TUBB2BQ9BVA1 445 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 BHMT2Q9H2M3 363 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 KANSL2Q9H9L4 492 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 ARHGAP20Q9P2F6 1191 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PCDHA12Q9UN75 941 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PLAGL2Q9UPG8 496 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 NOSIPQ9Y314 301 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 PCDHA1Q9Y5I3 950 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 SQORQ9Y6N5 450 aa7.96□□□□□ -1.14
PDLIM5-219ENST00000514743 A0A0J9YVX5 310 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 POTEB3A0JP26 581 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 POTECB2RU33 542 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 TNFRSF10AO00220 468 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 IGF2BP3O00425 579 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 WDR46O15213 610 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 BIRC5O15392 142 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 TMCC2O75069 709 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 MED24O75448 989 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 GDF11O95390 407 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ATP1A1P05023 1023 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms