RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CLDN23Q96B33 292 aa22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 MCRS1Q96EZ8 462 aa22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 HEBP1Q9NRV9 189 aa22.55■■□□□ 1.2
SQSTM1-215ENST00000514093 A0A1B0GUA9 196 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 CCDC194A0A1B0GVG4 234 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 SLITRK3O94933 977 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 GLRA2P23416 452 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 HOXA9P31269 272 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 EVCP57679 992 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 FZD5Q13467 585 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 LPAL2Q16609 132 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 PABPC1LQ4VXU2 614 aaKnown RBP22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 PPP4R3AQ6IN85 833 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 NEK8Q86SG6 692 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 POTEDQ86YR6 584 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 ZFHX4Q86UP3 3567 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 ARID2Q68CP9 1835 aa22.54■■□□□ 1.2
SQSTM1-215ENST00000514093 A0A087WWV3 80 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 CPLX1O14810 134 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 OR1D2P34982 312 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 ARL2P36404 184 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 POU5F1BQ06416 359 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 MTAPQ13126 283 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 GALNT17Q6IS24 598 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 POTEHQ6S545 545 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 NELL2Q99435 816 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 RTKNQ9BST9 563 aa22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 MRPS23Q9Y3D9 190 aaKnown RBP22.53■■□□□ 1.2
SQSTM1-215ENST00000514093 NOTCH4Q99466 2003 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 SHISA7A6NL88 538 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 PTGESO14684 152 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 NCAM2O15394 837 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 TBC1D4O60343 1298 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 DTNBO60941 627 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 IGFBP6P24592 240 aaPredicted RBP22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 SPIRE1Q08AE8 756 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 STK3Q13188 491 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 TOB2Q14106 344 aaPredicted RBP22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 ZNF852Q6ZMS4 543 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 PRMT8Q9NR22 394 aaPredicted RBP22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 SNTG2Q9NY99 539 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 GMEB2Q9UKD1 530 aa22.52■■□□□ 1.2
SQSTM1-215ENST00000514093 RPS9P46781 194 aaKnown RBP22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 SPEM2Q0P670 501 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 RAB33AQ14088 237 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 SLC5A9Q2M3M2 681 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 TANGO2Q6ICL3 276 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 PIK3AP1Q6ZUJ8 805 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 MAEAQ7L5Y9 396 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 EIF2AK1Q9BQI3 630 aaKnown RBP22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 POLR3FQ9H1D9 316 aaPredicted RBP22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 GJB4Q9NTQ9 266 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 KCNH3Q9ULD8 1083 aa22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 NDRG2Q9UN36 371 aaKnown RBP22.51■■□□□ 1.19
SQSTM1-215ENST00000514093 TTLL13PA6NNM8 815 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 TBX3O15119 743 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 ECI2O75521 394 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 DGAT1O75907 488 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 THP07101 528 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 GCFC2P16383 781 aaKnown RBP22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 PSMA5P28066 241 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 ADCY1Q08828 1119 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 ST3GAL2Q16842 350 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 UVSSAQ2YD98 709 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 OXER1Q8TDS5 423 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 NFKBIZQ9BYH8 718 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 USP20Q9Y2K6 914 aa22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.5■■□□□ 1.19
SQSTM1-215ENST00000514093 LRRIQ4A6NIV6 560 aa22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 ADRB1P08588 477 aa22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 NAB2Q15742 525 aa22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 EARS2Q5JPH6 523 aaKnown RBP22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 GPRC5CQ9NQ84 441 aa22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 MRPS17Q9Y2R5 130 aaKnown RBP22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 CDY1Q9Y6F8 540 aa22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 ZMYM2Q9UBW7 1377 aa22.49■■□□□ 1.19
SQSTM1-215ENST00000514093 FAM205CA6NFA0 338 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 RECQL4O94761 1208 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 RHOP08100 348 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 POU2F2P09086 479 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 CEBPBP17676 345 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 GRM2Q14416 872 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 PDXDC1Q6P996 788 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 NOSTRINQ8IVI9 506 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 PIGOQ8TEQ8 1089 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 CCDC43Q96MW1 224 aaKnown RBP22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 ANKEF1Q9NU02 776 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 MTRRQ9UBK8 725 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 VWA8A3KMH1 1905 aa22.48■■□□□ 1.19
SQSTM1-215ENST00000514093 NRG2O14511 850 aaPredicted RBP22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 USO1O60763 962 aaKnown RBP22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 BAG4O95429 457 aaKnown RBP22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 TDGF1P13385 188 aa22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 FGFR3P22607 806 aa22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 ELAVL2Q12926 359 aaKnown RBP22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 RUFY3Q7L099 469 aa22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 HSD17B14Q9BPX1 270 aa22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 FAM126AQ9BYI3 521 aaPredicted RBP22.47■■□□□ 1.19
SQSTM1-215ENST00000514093 PDZD7Q9H5P4 517 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms