RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 USP8P40818 1118 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 PIK3CAP42336 1068 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 MBTD1Q05BQ5 628 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 NOP9Q86U38 636 aaKnown RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 IFNLR1Q8IU57 520 aaPredicted RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 RPUSD2Q8IZ73 545 aaKnown RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 RFFLQ8WZ73 363 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 PI4K2AQ9BTU6 479 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 ISCUQ9H1K1 167 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 PTPRHQ9HD43 1115 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 ZHX1Q9UKY1 873 aaPredicted RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 ANKRD62A6NC57 917 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 H3BRB1 525 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 HARSP12081 509 aaKnown RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 CHRNB2P17787 502 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 NOP2P46087 812 aaKnown RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 AP3M2P53677 418 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 IGBP1P78318 339 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 MAP2K5Q13163 448 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 TAF1CQ15572 869 aaPredicted RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 MPZL3Q6UWV2 235 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 SLFN11Q7Z7L1 901 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 OR6J1Q8NGC5 347 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 CTNNBL1Q8WYA6 563 aaPredicted RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 ZBTB10Q96DT7 871 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 TUT1Q9H6E5 874 aaKnown RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 SEPT11Q9NVA2 429 aaKnown RBP16.1■□□□□ 0.17
VCAN-211ENST00000513984 TAS2R14Q9NYV8 317 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 RAB21Q9UL25 225 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 CITO14578 2027 aa16.1■□□□□ 0.17
VCAN-211ENST00000513984 INO80B-WBP1J3KQ70 363 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 HOXC6P09630 235 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 GZMAP12544 262 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 TNFSF9P41273 254 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 BIRC3Q13489 604 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 FAM187BQ17R55 369 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 SEZ6Q53EL9 994 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 ATF7IP2Q5U623 682 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 ZBTB33Q86T24 672 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 SLC47A2Q86VL8 602 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 WDR49Q8IV35 697 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 LMBR1Q8WVP7 490 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 TCHPQ9BT92 498 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
VCAN-211ENST00000513984 IFT122Q9HBG6 1241 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 RNF14Q9UBS8 474 aa16.09■□□□□ 0.17
VCAN-211ENST00000513984 CPSF3Q9UKF6 684 aaKnown RBP16.09■□□□□ 0.17
VCAN-211ENST00000513984 TMCO5BA8MYB1 307 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 ADCY6O43306 1168 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 CYP11B1P15538 503 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 PHKA2P46019 1235 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 PDE6CP51160 858 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 FMO1Q01740 532 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 SURF1Q15526 300 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 DGKDQ16760 1214 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 RGMBQ6NW40 437 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 OR5B17Q8NGF7 314 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 DHX38Q92620 1227 aaKnown RBP16.08■□□□□ 0.17
VCAN-211ENST00000513984 MINDY3Q9H8M7 445 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 PRMT7Q9NVM4 692 aaPredicted RBP16.08■□□□□ 0.17
VCAN-211ENST00000513984 ZNF446Q9NWS9 450 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 TNFSF13BQ9Y275 285 aa16.08■□□□□ 0.17
VCAN-211ENST00000513984 CCDC151A5D8V7 595 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 CES2O00748 559 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 RTN2O75298 545 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 TUBBP07437 444 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 SLC10A3P09131 477 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 TMOD1P28289 359 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 CXCR5P32302 372 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 HADHBP55084 474 aaKnown RBP16.08■□□□□ 0.16
VCAN-211ENST00000513984 CDR2Q01850 454 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 TNFAIP2Q03169 654 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 BRD3Q15059 726 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 TCEAL1Q15170 157 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 C17orf99Q6UX52 265 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 SYCE1Q8N0S2 351 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 SLC35G2Q8TBE7 412 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 DDX1Q92499 740 aaKnown RBP16.08■□□□□ 0.16
VCAN-211ENST00000513984 USP6NLQ92738 828 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 ELMO3Q96BJ8 720 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 PSMB7Q99436 277 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 THAP2Q9H0W7 228 aa16.08■□□□□ 0.16
VCAN-211ENST00000513984 B4GALT5O43286 388 aa16.07■□□□□ 0.16
VCAN-211ENST00000513984 ABCB4P21439 1286 aa16.07■□□□□ 0.16
VCAN-211ENST00000513984 ZNF568Q3ZCX4 644 aa16.07■□□□□ 0.16
VCAN-211ENST00000513984 IFNL1Q8IU54 200 aa16.07■□□□□ 0.16
VCAN-211ENST00000513984 ARHGEF26Q96DR7 871 aa16.07■□□□□ 0.16
VCAN-211ENST00000513984 ZNF668Q96K58 619 aaPredicted RBP16.07■□□□□ 0.16
VCAN-211ENST00000513984 CALR3Q96L12 384 aaKnown RBP16.07■□□□□ 0.16
VCAN-211ENST00000513984 PNKPQ96T60 521 aa16.07■□□□□ 0.16
VCAN-211ENST00000513984 APOBEC3GQ9HC16 384 aaKnown RBP16.07■□□□□ 0.16
VCAN-211ENST00000513984 ACP6Q9NPH0 428 aa16.07■□□□□ 0.16
VCAN-211ENST00000513984 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
VCAN-211ENST00000513984 RALGAPA2Q2PPJ7 1873 aa16.06■□□□□ 0.16
VCAN-211ENST00000513984 ZRANB2O95218 330 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms