RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 RRADP55042 308 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 SESN2P58004 480 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 PPP2CBP62714 309 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 PPP2CAP67775 309 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 SMAD3P84022 425 aaKnown RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 EIF4HQ15056 248 aaKnown RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 DGKDQ16760 1214 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 CCDC30Q5VVM6 783 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 ZNF530Q6P9A1 599 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 GLB1LQ6UWU2 654 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 ATF7IPQ6VMQ6 1270 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 FRMD7Q6ZUT3 714 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 GPR155Q7Z3F1 870 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 FILIP1Q7Z7B0 1213 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 ZNF610Q8N9Z0 462 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 SLC5A5Q92911 643 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 TSR2Q969E8 191 aaKnown RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 KATNBL1Q9H079 304 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 RWDD1Q9H446 243 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 EMC7Q9NPA0 242 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 NMRK2Q9NPI5 230 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 KCMF1Q9P0J7 381 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 MSRAQ9UJ68 235 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 APOBEC2Q9Y235 224 aaKnown RBP5.48□□□□□ -1.53
CLDND1-228ENST00000513873 C10orf71Q711Q0 1435 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 PTPRCP08575 1304 aa5.48□□□□□ -1.53
CLDND1-228ENST00000513873 NPEPPSL1A6NEC2 478 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 EXOC5O00471 708 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 LAMTOR5O43504 91 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 PLIN1O60240 522 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 EIF5BO60841 1220 aaKnown RBP5.47□□□□□ -1.53
CLDND1-228ENST00000513873 H2AFYO75367 372 aaKnown RBP5.47□□□□□ -1.53
CLDND1-228ENST00000513873 CSF2RBP32927 897 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 HMGA2P52926 109 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 SESN3P58005 492 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 PHC1P78364 1004 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 FAPQ12884 760 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 NOLC1Q14978 699 aaKnown RBP eCLIP5.47□□□□□ -1.53
CLDND1-228ENST00000513873 BROXQ5VW32 411 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 CREB3L3Q68CJ9 461 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 ESRP1Q6NXG1 681 aaKnown RBP5.47□□□□□ -1.53
CLDND1-228ENST00000513873 TOM1L2Q6ZVM7 507 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 MCM10Q7L590 875 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 EXOC6Q8TAG9 804 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 GFM2Q969S9 779 aaKnown RBP5.47□□□□□ -1.53
CLDND1-228ENST00000513873 ABHD8Q96I13 439 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 MYL10Q9BUA6 226 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 POFUT1Q9H488 388 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 TFCP2L1Q9NZI6 479 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 MCM8Q9UJA3 840 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 SLIT3O75094 1523 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 ABCC6O95255 1503 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 NCAPD2Q15021 1401 aa5.47□□□□□ -1.53
CLDND1-228ENST00000513873 NEMP1O14524 444 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 TCERG1O14776 1098 aaKnown RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 DAPK3O43293 454 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 TGM5O43548 720 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 B4GALT3O60512 393 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 MAFO75444 373 aaPredicted RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 FSHBP01225 129 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 VIL1P09327 827 aaKnown RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 BPIP17213 487 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 XPAP23025 273 aaPredicted RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 MVPQ14764 893 aaKnown RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 TERF2Q15554 542 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 TMEM200BQ69YZ2 307 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 IQSEC1Q6DN90 963 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 KIAA1841Q6NSI8 718 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 ITPRIPQ8IWB1 547 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 SSH1Q8WYL5 1049 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 MBD6Q96DN6 1003 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 C12orf65Q9H3J6 166 aaKnown RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 ZMAT4Q9H898 229 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 CNOT11Q9UKZ1 510 aaKnown RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 NOB1Q9ULX3 412 aaKnown RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 VWA7Q9Y334 891 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 NR2E1Q9Y466 385 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 DUSP10Q9Y6W6 482 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 TNRC6CQ9HCJ0 1690 aaKnown RBP5.46□□□□□ -1.54
CLDND1-228ENST00000513873 WDR17Q8IZU2 1322 aa5.46□□□□□ -1.54
CLDND1-228ENST00000513873 PIK3C2AO00443 1686 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 FOXN1O15353 648 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 KDM1AO60341 852 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 DDX58O95786 925 aaKnown RBP5.45□□□□□ -1.54
CLDND1-228ENST00000513873 PLATP00750 562 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 ZNF888P0CJ79 500 aaPredicted RBP5.45□□□□□ -1.54
CLDND1-228ENST00000513873 IL2RBP14784 551 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 CTCFP49711 727 aaPredicted RBP5.45□□□□□ -1.54
CLDND1-228ENST00000513873 MRE11P49959 708 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 CCT4P50991 539 aaKnown RBP5.45□□□□□ -1.54
CLDND1-228ENST00000513873 RAC3P60763 192 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 PCOLCEQ15113 449 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 MAN2A1Q16706 1144 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 KLHDC10Q6PID8 442 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 USP30Q70CQ3 517 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 BMP8AQ7Z5Y6 402 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 RASSF3Q86WH2 238 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 TTC5Q8N0Z6 440 aa5.45□□□□□ -1.54
CLDND1-228ENST00000513873 SLC16A11Q8NCK7 471 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms