RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	BLOC1S4	Q9NUP1	217 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	RIC1	Q4ADV7	1423 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	PLOD1	Q02809	727 aa	Predicted RBP	11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.85	□□□□□ -0.51	1e-7	■■□□□ 12.2
PDCD6-210	ENST00000513582	GRIK5	Q16478	980 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	INTS5	Q6P9B9	1019 aa	Known RBP	11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	PPP1R21	Q6ZMI0	780 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZDHHC14	Q8IZN3	488 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	MIS12	Q9H081	205 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	ASIC3	Q9UHC3	531 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	KIAA1024	Q9UPX6	916 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	STARD13	Q9Y3M8	1113 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	GMEB1	Q9Y692	573 aa		11.85	□□□□□ -0.51
PDCD6-210	ENST00000513582	AKAP11	Q9UKA4	1901 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582		A0A0G2JND7	137 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L15	C9J2P7	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L13	C9JLJ4	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L11	C9JVI0	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L18	D6R9N7	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L22	D6RA61	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L17	D6RBQ6	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L19	D6RCP7	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L20	D6RJB6	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	PODXL	O00592	558 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	CLIC2	O15247	247 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	GSC2	O15499	205 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	SORBS3	O60504	671 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	CAMTA2	O94983	1202 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	LDHC	P07864	332 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	CCDC166	P0CW27	439 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	GJC1	P36383	396 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	DSG1	Q02413	1049 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L24	Q0WX57	530 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	GRB10	Q13322	594 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	MOGS	Q13724	837 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	USP17L6P	Q6QN14	398 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	TRIM59	Q8IWR1	403 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	C4orf33	Q8N1A6	199 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	ARHGEF26	Q96DR7	871 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	FNBP1	Q96RU3	617 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	SH2D3A	Q9BRG2	576 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	ARL8B	Q9NVJ2	186 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	STX18	Q9P2W9	335 aa	Known RBP	11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	DDAH1	O94760	285 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	STK10	O94804	968 aa	Known RBP	11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	CHRNA3	P32297	505 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	DRG2	P55039	364 aa	Known RBP	11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	ADAR	P55265	1226 aa	Known RBP	11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	HPCA	P84074	193 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	R3HDM1	Q15032	1099 aa	Known RBP	11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	PPP2R5E	Q16537	467 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	GSTA3	Q16772	222 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	PHLDB3	Q6NSJ2	640 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	CLNK	Q7Z7G1	428 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	NEK8	Q86SG6	692 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	FAM161B	Q96MY7	647 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	OLFM3	Q96PB7	478 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	NR1H4	Q96RI1	486 aa	Predicted RBP	11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	BTBD10	Q9BSF8	475 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZNF287	Q9HBT7	754 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	RIC8A	Q9NPQ8	531 aa		11.84	□□□□□ -0.51
PDCD6-210	ENST00000513582	FAM47DP	A6NHR8	397 aa		11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	CCDC22	O60826	627 aa		11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	TTLL1	O95922	423 aa		11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	ARHGAP44	Q17R89	818 aa		11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	NME8	Q8N427	588 aa		11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	NSUN4	Q96CB9	384 aa	Known RBP	11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	AK8	Q96MA6	479 aa		11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	METTL14	Q9HCE5	456 aa	Known RBP	11.83	□□□□□ -0.51
PDCD6-210	ENST00000513582	GSTTP1	A0A1W2PQM5	241 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	BOLA2-SMG1P6	H3BVE0	249 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	HARS	P12081	509 aa	Known RBP	11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	VCAM1	P19320	739 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	GRIA2	P42262	883 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	ZBTB16	Q05516	673 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	PRR16	Q569H4	304 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	CAPN12	Q6ZSI9	719 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	KCNK18	Q7Z418	384 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	SCUBE1	Q8IWY4	988 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	VGLL2	Q8N8G2	317 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	LINC00116	Q8NCU8	138 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	STKLD1	Q8NE28	680 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	C10orf82	Q8WW14	230 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	ART4	Q93070	314 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	PRR11	Q96HE9	360 aa	Predicted RBP	11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	NUDT12	Q9BQG2	462 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	MTA3	Q9BTC8	594 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	EBF3	Q9H4W6	596 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	HDAC9	Q9UKV0	1011 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	TXNDC9	O14530	226 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	VIL1	P09327	827 aa	Known RBP	11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	POTEJ	P0CG39	1038 aa		11.83	□□□□□ -0.52
PDCD6-210	ENST00000513582	STAT3	P40763	770 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms