RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 CDR2LQ86X02 465 aaPredicted RBP11.68□□□□□ -0.54
CLDND1-227ENST00000513452 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
CLDND1-227ENST00000513452 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 TBCKQ8TEA7 893 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 FAM3CQ92520 227 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 PARP2Q9UGN5 583 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 PIAS3Q9Y6X2 628 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 COL4A2P08572 1712 aa11.68□□□□□ -0.54
CLDND1-227ENST00000513452 FASNP49327 2511 aaKnown RBP11.67□□□□□ -0.54
CLDND1-227ENST00000513452 IGF2RP11717 2491 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 C1QTNF9BB2RNN3 333 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 EML1O00423 815 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 B4GALT5O43286 388 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 NPTXRO95502 500 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 C1QTNF9P0C862 333 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 OR1D2P34982 312 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
CLDND1-227ENST00000513452 LIMK1P53667 647 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 RCAN1P53805 252 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 RAB33AQ14088 237 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 CCDC6Q16204 474 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 UNQ6494/PRO21346Q6UXR6 183 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 C12orf50Q8NA57 414 aaPredicted RBP11.67□□□□□ -0.54
CLDND1-227ENST00000513452 ETNPPLQ8TBG4 499 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 TCP11Q8WWU5 503 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 TRMT61BQ9BVS5 477 aaKnown RBP11.67□□□□□ -0.54
CLDND1-227ENST00000513452 ANO2Q9NQ90 1003 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 RXFP3Q9NSD7 469 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 VPS54Q9P1Q0 977 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
CLDND1-227ENST00000513452 ZMIZ1Q9ULJ6 1067 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 PKD1L2Q7Z442 2459 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 NOTCH4Q99466 2003 aa11.67□□□□□ -0.54
CLDND1-227ENST00000513452 F5P12259 2224 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 CCDC196A0A1B0GTZ2 297 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 NRG2O14511 850 aaPredicted RBP11.66□□□□□ -0.54
CLDND1-227ENST00000513452 TM4SF5O14894 197 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 ASAP2O43150 1006 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 ARF4P18085 180 aaPredicted RBP11.66□□□□□ -0.54
CLDND1-227ENST00000513452 GDI1P31150 447 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 CNR2P34972 360 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 PTENP60484 403 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 EXOSC10Q01780 885 aaKnown RBP11.66□□□□□ -0.54
CLDND1-227ENST00000513452 AKAP17AQ02040 695 aaKnown RBP11.66□□□□□ -0.54
CLDND1-227ENST00000513452 MBTD1Q05BQ5 628 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 TUSC3Q13454 348 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 GAS6Q14393 721 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 PCBP1Q15365 356 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLDND1-227ENST00000513452 AMHR2Q16671 573 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 UVSSAQ2YD98 709 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 FAM78AQ5JUQ0 283 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 PDXDC1Q6P996 788 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 DHX32Q7L7V1 743 aaKnown RBP11.66□□□□□ -0.54
CLDND1-227ENST00000513452 LONP2Q86WA8 852 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 IRF7Q92985 503 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 ESYT1Q9BSJ8 1104 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 ZFP14Q9HCL3 533 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 ZNF334Q9HCZ1 680 aaPredicted RBP11.66□□□□□ -0.54
CLDND1-227ENST00000513452 PPME1Q9Y570 386 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 CDY1Q9Y6F8 540 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 ZMYM2Q9UBW7 1377 aa11.66□□□□□ -0.54
CLDND1-227ENST00000513452 TICRRQ7Z2Z1 1910 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 CYP3A7-CYP3A51PA0A087WV96 503 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 K7ESF4 209 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 PRPF3O43395 683 aaKnown RBP11.65□□□□□ -0.54
CLDND1-227ENST00000513452 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLDND1-227ENST00000513452 CHRNB1P11230 501 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 CYP3A7P24462 503 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
CLDND1-227ENST00000513452 FGD1P98174 961 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 ELAVL2Q12926 359 aaKnown RBP11.65□□□□□ -0.54
CLDND1-227ENST00000513452 TFDP1Q14186 410 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 STPG1Q5TH74 334 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 SLC27A1Q6PCB7 646 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 VITQ6UXI7 678 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 Q6ZS52 159 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 SPEM1Q8N4L4 309 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 TCEAL4Q96EI5 215 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 MTRQ99707 1265 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 LXNQ9BS40 222 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 SLKQ9H2G2 1235 aaPredicted RBP11.65□□□□□ -0.54
CLDND1-227ENST00000513452 ARRDC1-AS1Q9H2J1 176 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 RBM12Q9NTZ6 932 aaKnown RBP11.65□□□□□ -0.54
CLDND1-227ENST00000513452 SPEGQ15772 3267 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 RALGAPA1Q6GYQ0 2036 aa11.65□□□□□ -0.54
CLDND1-227ENST00000513452 PTGESO14684 152 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 AXIN1O15169 862 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 SLC37A4O43826 429 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 KCNK5O95279 499 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 LRG1P02750 347 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 P4HBP07237 508 aaKnown RBP11.64□□□□□ -0.55
CLDND1-227ENST00000513452 PSMC3P17980 439 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 CCNE1P24864 410 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 HOXC13P31276 330 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 NLRP5P59047 1200 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 PTGDRQ13258 359 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
CLDND1-227ENST00000513452 CAPSQ13938 189 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms