RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 CPB2Q96IY4 423 aa15.47■□□□□ 0.07
SPCS3-204ENST00000513139 KXD1Q9BQD3 176 aa15.47■□□□□ 0.07
SPCS3-204ENST00000513139 IER2Q9BTL4 223 aa15.47■□□□□ 0.07
SPCS3-204ENST00000513139 SLC26A6Q9BXS9 759 aa15.47■□□□□ 0.07
SPCS3-204ENST00000513139 NXF3Q9H4D5 531 aaKnown RBP15.47■□□□□ 0.07
SPCS3-204ENST00000513139 PARD6AQ9NPB6 346 aa15.47■□□□□ 0.07
SPCS3-204ENST00000513139 RYDENQ9NUL5 291 aaKnown RBP15.47■□□□□ 0.07
SPCS3-204ENST00000513139 WRAP73Q9P2S5 460 aaPredicted RBP15.47■□□□□ 0.07
SPCS3-204ENST00000513139 DDX25Q9UHL0 483 aaKnown RBP15.47■□□□□ 0.07
SPCS3-204ENST00000513139 VAV3Q9UKW4 847 aa15.47■□□□□ 0.07
SPCS3-204ENST00000513139 BAHCC1Q9P281 2608 aa15.47■□□□□ 0.07
SPCS3-204ENST00000513139 INO80B-WBP1J3KQ70 363 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 M0R2N6 131 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 CCL16O15467 120 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 ARF4P18085 180 aaPredicted RBP15.46■□□□□ 0.07
SPCS3-204ENST00000513139 YWHABP31946 246 aaKnown RBP15.46■□□□□ 0.07
SPCS3-204ENST00000513139 TFDP1Q14186 410 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 PPP2R5DQ14738 602 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 PSMD5Q16401 504 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 LAIR1Q6GTX8 287 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 NPAS3Q8IXF0 933 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 CELF5Q8N6W0 485 aaKnown RBP15.46■□□□□ 0.07
SPCS3-204ENST00000513139 DAGLBQ8NCG7 672 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.07
SPCS3-204ENST00000513139 MTRQ99707 1265 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 APOL6Q9BWW8 343 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 NFKBIZQ9BYH8 718 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 KCNMB3Q9NPA1 279 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 GDE1Q9NZC3 331 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 RAB23Q9ULC3 237 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
SPCS3-204ENST00000513139 SPAG17Q6Q759 2223 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 TICRRQ7Z2Z1 1910 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 SLC30A4O14863 429 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 CDC45O75419 566 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 AKAP5P24588 427 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 MBTD1Q05BQ5 628 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
SPCS3-204ENST00000513139 MTAPQ13126 283 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 TUSC3Q13454 348 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 RAB33AQ14088 237 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 AMHR2Q16671 573 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 PABPC1LQ4VXU2 614 aaKnown RBP15.45■□□□□ 0.06
SPCS3-204ENST00000513139 FAM171A1Q5VUB5 890 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 GALNT17Q6IS24 598 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 SLC27A1Q6PCB7 646 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 TSSK4Q6SA08 328 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 BLIDQ8IZY5 108 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 DNASE1L2Q92874 299 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 LXNQ9BS40 222 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 AGXT2Q9BYV1 514 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 SLKQ9H2G2 1235 aaPredicted RBP15.45■□□□□ 0.06
SPCS3-204ENST00000513139 PDCD11Q14690 1871 aaKnown RBP15.45■□□□□ 0.06
SPCS3-204ENST00000513139 GREB1Q4ZG55 1949 aa15.45■□□□□ 0.06
SPCS3-204ENST00000513139 CEP295Q9C0D2 2601 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 COL4A2P08572 1712 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 A0A1B0GUA9 196 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 SLC37A4O43826 429 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 TDGF1P13385 188 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 EPHA7Q15375 998 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 PPM1JQ5JR12 505 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 AXDND1Q5T1B0 1012 aaPredicted RBP15.44■□□□□ 0.06
SPCS3-204ENST00000513139 TRIM22Q8IYM9 498 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 ZNF687Q8N1G0 1237 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 SLC7A14Q8TBB6 771 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 RABGGTAQ92696 567 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 CHRDQ9H2X0 955 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 ZSWIM4Q9H7M6 989 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 AVENQ9NQS1 362 aaPredicted RBP15.44■□□□□ 0.06
SPCS3-204ENST00000513139 HEBP1Q9NRV9 189 aa15.44■□□□□ 0.06
SPCS3-204ENST00000513139 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
SPCS3-204ENST00000513139 DNMT3BQ9UBC3 853 aaKnown RBP15.44■□□□□ 0.06
SPCS3-204ENST00000513139 ATRXP46100 2492 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 SHISA7A6NL88 538 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 MAN2B1O00754 1011 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 TBX3O15119 743 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 RETP07949 1114 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 CPA1P15085 419 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 GCFC2P16383 781 aaKnown RBP15.43■□□□□ 0.06
SPCS3-204ENST00000513139 EVCP57679 992 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 SPEM2Q0P670 501 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 PPP4R3AQ6IN85 833 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 KRT25Q7Z3Z0 450 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 CEP57Q86XR8 500 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 KCNB2Q92953 911 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 ELSPBP1Q96BH3 223 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 PAAF1Q9BRP4 392 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 XPNPEP1Q9NQW7 623 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 HCFC1R1Q9NWW0 138 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 KLK14Q9P0G3 267 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 PARP2Q9UGN5 583 aa15.43■□□□□ 0.06
SPCS3-204ENST00000513139 MRPS23Q9Y3D9 190 aaKnown RBP15.43■□□□□ 0.06
SPCS3-204ENST00000513139 ADAM12O43184 909 aa15.42■□□□□ 0.06
SPCS3-204ENST00000513139 FOXD2O60548 495 aaPredicted RBP15.42■□□□□ 0.06
SPCS3-204ENST00000513139 KIF4AO95239 1232 aa15.42■□□□□ 0.06
SPCS3-204ENST00000513139 NPTXRO95502 500 aa15.42■□□□□ 0.06
SPCS3-204ENST00000513139 CAPSQ13938 189 aa15.42■□□□□ 0.06
SPCS3-204ENST00000513139 NPY5RQ15761 445 aa15.42■□□□□ 0.06
SPCS3-204ENST00000513139 INF2Q27J81 1249 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms