RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CLPTM1LQ96KA5 538 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 FAM193BQ96PV7 902 aaPredicted RBP5.28□□□□□ -1.56
HTT-210ENST00000512909 GTPBP4Q9BZE4 634 aaKnown RBP5.28□□□□□ -1.56
HTT-210ENST00000512909 NELFAQ9H3P2 528 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 IL23AQ9NPF7 189 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.28□□□□□ -1.56
HTT-210ENST00000512909 ZFYVE16Q7Z3T8 1539 aa5.28□□□□□ -1.56
HTT-210ENST00000512909 GPATCH8Q9UKJ3 1502 aaKnown RBP5.28□□□□□ -1.56
HTT-210ENST00000512909 TMEM127O75204 238 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 GPR32O75388 356 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 GNAT2P19087 354 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 CR2P20023 1033 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 LPOP22079 712 aaPredicted RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 CNR2P34972 360 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 RPS19P39019 145 aaKnown RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 CASRP41180 1078 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 IL12RB1P42701 662 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 WASP42768 502 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 GZMKP49863 264 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 ADCY7P51828 1080 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 CDC42EP1Q00587 391 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 HDAC1Q13547 482 aaPredicted RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 IL10RAQ13651 578 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 RIN1Q13671 783 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 NFYCQ13952 458 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 ZNF267Q14586 743 aaPredicted RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 RAB39AQ14964 217 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 RNF151Q2KHN1 245 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 MST1LQ2TV78 715 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 CCSAPQ6IQ19 270 aaPredicted RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 GLB1LQ6UWU2 654 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 CCDC149Q6ZUS6 474 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 TP53I13Q8NBR0 393 aaPredicted RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.27□□□□□ -1.57
HTT-210ENST00000512909 SLC35G2Q8TBE7 412 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 MDM1Q8TC05 714 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 KAT5Q92993 513 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 NEIL1Q96FI4 390 aaPredicted RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 CDK5RAP3Q96JB5 506 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 LDAHQ9H6V9 325 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 SEC61A2Q9H9S3 476 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 MSL2Q9HCI7 577 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 GNL3LQ9NVN8 582 aaKnown RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 OBP2AQ9NY56 170 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 FEZ2Q9UHY8 353 aaPredicted RBP5.27□□□□□ -1.57
HTT-210ENST00000512909 LIMCH1Q9UPQ0 1083 aa5.27□□□□□ -1.57
HTT-210ENST00000512909 PTPRMP28827 1452 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 ZNF518AQ6AHZ1 1483 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 MAGI2Q86UL8 1455 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 MYBBP1AQ9BQG0 1328 aaKnown RBP5.26□□□□□ -1.57
HTT-210ENST00000512909 CFAP74Q9C0B2 1584 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 C9orf84Q5VXU9 1444 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 VPS8Q8N3P4 1428 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 UBE2QL1A1L167 161 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 H3BUI4 141 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 SGTAO43765 313 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 NOBOXO60393 691 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 MFAP3LO75121 409 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 SYN1P17600 705 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 CFPP27918 469 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 OS9Q13438 667 aaPredicted RBP5.26□□□□□ -1.57
HTT-210ENST00000512909 C3orf36Q3SXR2 165 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 HS1BP3Q53T59 392 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 SLFN13Q68D06 897 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 MFSD5Q6N075 450 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 EPM2AIP1Q7L775 607 aaPredicted RBP5.26□□□□□ -1.57
HTT-210ENST00000512909 DGKHQ86XP1 1220 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 MSL3Q8N5Y2 521 aaKnown RBP5.26□□□□□ -1.57
HTT-210ENST00000512909 DIS3LQ8TF46 1054 aaKnown RBP5.26□□□□□ -1.57
HTT-210ENST00000512909 OR14A2Q96R54 314 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 AJAP1Q9UKB5 411 aaPredicted RBP5.26□□□□□ -1.57
HTT-210ENST00000512909 OAZ3Q9UMX2 235 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 CLCA2Q9UQC9 943 aa5.26□□□□□ -1.57
HTT-210ENST00000512909 ARHGEF12Q9NZN5 1544 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 PRR5-ARHGAP8B1AHC4 643 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 PRPF3O43395 683 aaKnown RBP5.25□□□□□ -1.57
HTT-210ENST00000512909 B4GALT3O60512 393 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 GNAI3P08754 354 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 DDCP20711 480 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 TBX4P57082 545 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 GNAI1P63096 354 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 PPP3CAQ08209 521 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 ACAP1Q15027 740 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 BRD3Q15059 726 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 ATAT1Q5SQI0 421 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 TAX1BP1Q86VP1 789 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 ZBTB34Q8NCN2 500 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 STON2Q8WXE9 905 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 TMEM176AQ96HP8 235 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 FAM167AQ96KS9 214 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 DPYSL5Q9BPU6 564 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 SARS2Q9NP81 518 aaKnown RBP5.25□□□□□ -1.57
HTT-210ENST00000512909 LMBRD1Q9NUN5 540 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 GABBR1Q9UBS5 961 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 SCOCQ9UIL1 159 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 RUVBL1Q9Y265 456 aaKnown RBP5.25□□□□□ -1.57
HTT-210ENST00000512909 STXBP5LQ9Y2K9 1186 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 MYO5CQ9NQX4 1742 aa5.25□□□□□ -1.57
HTT-210ENST00000512909 MGEA5O60502 916 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms