RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 EFHBQ8N7U6 833 aa17.38■□□□□ 0.37
DDX41-214ENST00000512334 MRPL43Q8N983 215 aaKnown RBP17.38■□□□□ 0.37
DDX41-214ENST00000512334 HVCN1Q96D96 273 aa17.38■□□□□ 0.37
DDX41-214ENST00000512334 SNX27Q96L92 541 aa17.38■□□□□ 0.37
DDX41-214ENST00000512334 HAPLN2Q9GZV7 340 aa17.38■□□□□ 0.37
DDX41-214ENST00000512334 GDPD2Q9HCC8 539 aa17.38■□□□□ 0.37
DDX41-214ENST00000512334 TRIP11Q15643 1979 aa17.38■□□□□ 0.37
DDX41-214ENST00000512334 SMIM28A0A1B0GU29 152 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 FRMD3A2A2Y4 597 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 SOD2P04179 222 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 MYBP10242 640 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 PFKFB1P16118 471 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 CMA1P23946 247 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 AFMP43652 599 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 DLX2Q07687 328 aaPredicted RBP17.37■□□□□ 0.37
DDX41-214ENST00000512334 COL19A1Q14993 1142 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 CLUL1Q15846 466 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 LEXMQ3ZCV2 418 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 LLGL2Q6P1M3 1020 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 HASPINQ8TF76 798 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 PPP1R10Q96QC0 940 aaKnown RBP17.37■□□□□ 0.37
DDX41-214ENST00000512334 ACCSQ96QU6 501 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 PAAF1Q9BRP4 392 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 MSTO1Q9BUK6 570 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 OLFML3Q9NRN5 406 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 ADAM28Q9UKQ2 775 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 EXOC7Q9UPT5 735 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 PCDHB13Q9Y5F0 798 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 XIRP2A4UGR9 3374 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 CITO14578 2027 aa17.37■□□□□ 0.37
DDX41-214ENST00000512334 BRWD1Q9NSI6 2320 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 C2CD2LO14523 706 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 TBX10O75333 385 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 PPP1R37O75864 691 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 KIF4AO95239 1232 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 URODP06132 367 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 CXCL8P10145 99 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 CASP1P29466 404 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 LTBRP36941 435 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 CASP5P51878 434 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 NAB2Q15742 525 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 KYAT1Q16773 422 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
DDX41-214ENST00000512334 KIAA1841Q6NSI8 718 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 FUT10Q6P4F1 479 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 SLC39A4Q6P5W5 647 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 ALKAL1Q6UXT8 129 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 TAS1R1Q7RTX1 841 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 SYCP3Q8IZU3 236 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 C7orf25Q9BPX7 421 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 HERC2P3Q9BVR0 1158 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 BLZF1Q9H2G9 400 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 MRPL17Q9NRX2 175 aaKnown RBP17.36■□□□□ 0.37
DDX41-214ENST00000512334 SLC38A7Q9NVC3 462 aa17.36■□□□□ 0.37
DDX41-214ENST00000512334 BARX2Q9UMQ3 279 aaPredicted RBP17.36■□□□□ 0.37
DDX41-214ENST00000512334 TCF20Q9UGU0 1960 aaKnown RBP17.35■□□□□ 0.37
DDX41-214ENST00000512334 A0A0B4J269 797 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 TISP43B9A030 160 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 ANKRD63C9JTQ0 380 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 OGTO15294 1046 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 GLP2RO95838 553 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 CLTAP09496 248 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 SRGAP2BP0DMP2 458 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 BMP1P13497 986 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 TNFSF9P41273 254 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 GLUD2P49448 558 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 RBM10P98175 930 aaKnown RBP17.35■□□□□ 0.37
DDX41-214ENST00000512334 KCNA1Q09470 495 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 ALCAMQ13740 583 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 PTPN14Q15678 1187 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 SLC10A6Q3KNW5 377 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 SLFN12LQ6IEE8 588 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
DDX41-214ENST00000512334 STXBP4Q6ZWJ1 553 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 GRAMD1CQ8IYS0 662 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.35■□□□□ 0.37
DDX41-214ENST00000512334 HPS3Q969F9 1004 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 FAM212AQ96EL1 285 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 ZMAT2Q96NC0 199 aaKnown RBP17.35■□□□□ 0.37
DDX41-214ENST00000512334 STRA6Q9BX79 667 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 COL25A1Q9BXS0 654 aaPredicted RBP17.35■□□□□ 0.37
DDX41-214ENST00000512334 EMILIN2Q9BXX0 1053 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 FGFBP2Q9BYJ0 223 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 GPR62Q9BZJ7 368 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 IKZF4Q9H2S9 585 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 RPF1Q9H9Y2 349 aaKnown RBP17.35■□□□□ 0.37
DDX41-214ENST00000512334 GOLGA2P5Q9HBQ8 144 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 CNTN3Q9P232 1028 aa17.35■□□□□ 0.37
DDX41-214ENST00000512334 SF3B1O75533 1304 aaKnown RBP eCLIP17.35■□□□□ 0.37
DDX41-214ENST00000512334 DLL1O00548 723 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 CLASP2O75122 1294 aaKnown RBP17.34■□□□□ 0.37
DDX41-214ENST00000512334 B3GAT3O94766 335 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 PRPF6O94906 941 aaKnown RBP17.34■□□□□ 0.37
DDX41-214ENST00000512334 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 KCNE1P15382 129 aa17.34■□□□□ 0.37
DDX41-214ENST00000512334 ANP32AP39687 249 aaKnown RBP17.34■□□□□ 0.37
DDX41-214ENST00000512334 SYKP43405 635 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms