RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CSF3RQ99062 836 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRIM55Q9BYV6 548 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRIM39Q9HCM9 518 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CAPN11Q9UMQ6 739 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 LUC7L2Q9Y383 392 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 A0A1W2PQC6 194 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TCP10L2B9ZVM9 353 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CES2O00748 559 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC37A4O43826 429 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GMNNO75496 209 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SMC2O95347 1197 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 UNGP13051 313 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CTNNA2P26232 953 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 POLD2P49005 469 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCT4P50991 539 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC18A1P54219 525 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PMS2P54278 862 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 OAZ1P54368 228 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PLAURQ03405 335 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SMC1AQ14683 1233 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TNIP1Q15025 636 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 OASLQ15646 514 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ENOX2Q16206 610 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GPR162Q16538 588 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CFAP100Q494V2 611 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 DDX46Q7L014 1031 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RTL10Q7L3V2 364 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 TBC1D1Q86TI0 1168 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF485Q8NCK3 441 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FEM1CQ96JP0 617 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM84BQ96KN1 310 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PCDHB18PQ96TA0 734 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PACSIN1Q9BY11 444 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PRKD2Q9BZL6 878 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC13A1Q9BZW2 595 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GREM2Q9H772 168 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC39A2Q9NP94 309 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RHBDD3Q9Y3P4 386 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 NR2E3Q9Y5X4 410 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PCNX1Q96RV3 2341 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GNAT3A8MTJ3 354 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ORC4O43929 436 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZBED4O75132 1171 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLITRK3O94933 977 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PEX11BO96011 259 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 GH1P01241 217 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SHBGP04278 402 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 KRT18P05783 430 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PAX1P15863 534 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CSRP1P21291 193 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 LMOD3Q0VAK6 560 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 BNIP1Q12981 228 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 KIAA0040Q15053 153 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 BRDTQ58F21 947 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC15A3Q8IY34 581 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 C10orf111Q8N326 155 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLC35C1Q96A29 364 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 EXOC4Q96A65 974 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF594Q96JF6 807 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RMDN2Q96LZ7 410 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 PLCD4Q9BRC7 762 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCSER1Q9C0I3 900 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 RASSF4Q9H2L5 321 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZHX3Q9H4I2 956 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SMYD2Q9NRG4 433 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 FOXD4L1Q9NU39 408 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 IMPACTQ9P2X3 320 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 USP22Q9UPT9 525 aa1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 BZW2Q9Y6E2 419 aaKnown RBP1.81□□□□□ -2.12
TRAPPC13-211ENST00000512009 SRRM2Q9UQ35 2752 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAT3Q8TDW7 4589 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 FASNP49327 2511 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MBLAC1A4D2B0 266 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PP2D1A8MPX8 630 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PDLIM1O00151 329 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PDHXO00330 501 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 WNT10BO00744 389 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 KIAA0391O15091 583 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 NMT2O60551 498 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 UPP2O95045 317 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 SNUPNO95149 360 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 C1QCP02747 245 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 TXKP42681 527 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PHKA1P46020 1223 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 EVA1CP58658 441 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 NUCB2P80303 420 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MRPS5P82675 430 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MRPS9P82933 396 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CETN1Q12798 172 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 KCNB1Q14721 858 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 UBE3CQ15386 1083 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 DCAF6Q58WW2 860 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 PLA2G4FQ68DD2 849 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 KRBA2Q6ZNG9 492 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 USP51Q70EK9 711 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 KRT26Q7Z3Y9 468 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC71Q8IV32 467 aaPredicted RBP1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 MFSD6LQ8IWD5 586 aa1.8□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC170Q8IYT3 715 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms