RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 FAM198AQ9UFP1 575 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 RSPH14Q9UHP6 348 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 GIT1Q9Y2X7 761 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 PCDHGA11Q9Y5H2 935 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 SNED1Q8TER0 1413 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 GPR75-ASB3A0A0A6YYF3 556 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 A0A1B0GUL7 405 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 CTAGE9A4FU28 777 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 PRKD3O94806 890 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 SLFN14P0C7P3 912 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 PYGMP11217 842 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 CKMT1AP12532 417 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 ATP5DP30049 168 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 S100A5P33763 92 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 IDUAP35475 653 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 RPIAP49247 311 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 CXCL9Q07325 125 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 GRB10Q13322 594 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 COG2Q14746 738 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 TEAD4Q15561 434 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 IFIT1BQ5T764 474 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 RNF20Q5VTR2 975 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 RPUSD3Q6P087 351 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 NXPE4Q6UWF7 544 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 VGLL2Q8N8G2 317 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 RNF139Q8WU17 664 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 CHFRQ96EP1 664 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 RRP36Q96EU6 259 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 HSPBAP1Q96EW2 488 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 NRBF2Q96F24 287 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 C8orf76Q96K31 380 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 EXOC2Q96KP1 924 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 TMEM74Q96NL1 305 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 TAAR9Q96RI9 348 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 KCNK17Q96T54 332 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 TRIM5Q9C035 493 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 C2orf40Q9H1Z8 148 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 MRPL46Q9H2W6 279 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 VCX3BQ9H321 246 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 ATP13A1Q9HD20 1204 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 PICK1Q9NRD5 415 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 TLR7Q9NYK1 1049 aaKnown RBP5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 COQ3Q9NZJ6 369 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZNRF3Q9ULT6 936 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 TLR6Q9Y2C9 796 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 FER1L6Q2WGJ9 1857 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 CCDC88AQ3V6T2 1871 aa5.43□□□□□ -1.54
TRAPPC11-208ENST00000511955 LTBP3Q9NS15 1303 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 A0A087WV62 115 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SLC12A8A0AV02 714 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 STMND1H3BQB6 276 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 PSMD14O00487 310 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 AOC2O75106 756 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 DHRS4L1P0CG22 281 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 MAPK3P27361 379 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 GIPRP48546 466 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 PEX5P50542 639 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 DMPKQ09013 629 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 KIF5AQ12840 1032 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 KRBOX4Q5JUW0 171 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 COX20Q5RI15 118 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 C11orf88Q6PI97 169 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 XKR5Q6UX68 686 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 RPAP2Q8IXW5 612 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 PLD6Q8N2A8 252 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 ATP11CQ8NB49 1132 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 MDM1Q8TC05 714 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 DDX1Q92499 740 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CASP10Q92851 521 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 USP7Q93009 1102 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 AIFM3Q96NN9 605 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 FERD3LQ96RJ6 166 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CRACR2AQ9BSW2 395 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 RSRP1Q9BUV0 290 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SPATA9Q9BWV2 254 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 NACAP1Q9BZK3 213 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 RASSF4Q9H2L5 321 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CERS4Q9HA82 394 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CCDC177Q9NQR7 707 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 C1orf112Q9NSG2 853 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 AKAP7Q9P0M2 348 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 VPS28Q9UK41 221 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 DENND2AQ9ULE3 1009 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SCAF8Q9UPN6 1271 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 TMED5Q9Y3A6 229 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 SNX8Q9Y5X2 465 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 LRRC37AA6NMS7 1700 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 ZSCAN5CA6NGD5 496 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 PI4K2BG5E9Z4 385 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 KDM1AO60341 852 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 PALMO75781 387 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 CIAO1O76071 339 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 NPPAP01160 153 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 HIBADHP31937 336 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 RECQLP46063 649 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 PRIM2P49643 509 aa5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 GMPSP49915 693 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-208ENST00000511955 YBEYP58557 167 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms