RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 NAB2Q15742 525 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 PPM1JQ5JR12 505 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 AXDND1Q5T1B0 1012 aaPredicted RBP21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 MCRS1Q96EZ8 462 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 JAKMIP1Q96N16 626 aaKnown RBP21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 MTRQ99707 1265 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 PARP2Q9UGN5 583 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 FAM208BQ5VWN6 2430 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 TRIP11Q15643 1979 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 TICRRQ7Z2Z1 1910 aa21.14■□□□□ 0.97
HMGCS1-206ENST00000511774 TTLL13PA6NNM8 815 aa21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 IRX6P78412 446 aaPredicted RBP21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 SPIRE1Q08AE8 756 aa21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 PCBP1Q15365 356 aaKnown RBP eCLIP21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 PABPC1LQ4VXU2 614 aaKnown RBP21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 TANGO2Q6ICL3 276 aa21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 EXOC8Q8IYI6 725 aa21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 DAGLBQ8NCG7 672 aa21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 TRIM6Q9C030 488 aaPredicted RBP21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 SLKQ9H2G2 1235 aaPredicted RBP21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 GMEB2Q9UKD1 530 aa21.13■□□□□ 0.97
HMGCS1-206ENST00000511774 ZFYVE26Q68DK2 2539 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 SLC30A4O14863 429 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 ZZEF1O43149 2961 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 XYLBO75191 536 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 ECI2O75521 394 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 POU2F2P09086 479 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 GLRA2P23416 452 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 FCARP24071 287 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 CYP4A11Q02928 519 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 ADCY1Q08828 1119 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 TUSC3Q13454 348 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 EPHA7Q15375 998 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 ZNF852Q6ZMS4 543 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 FBXL16Q8N461 479 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 NELL2Q99435 816 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 NDRG2Q9UN36 371 aaKnown RBP21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 SNX14Q9Y5W7 946 aa21.12■□□□□ 0.97
HMGCS1-206ENST00000511774 ZMYM2Q9UBW7 1377 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 A0A1B0GUA9 196 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 GDF9O60383 454 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 CEBPBP17676 345 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 OR1D2P34982 312 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 ARL2P36404 184 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 POU5F1BQ06416 359 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 RAB33AQ14088 237 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 MXD4Q14582 209 aaPredicted RBP21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 SLC27A1Q6PCB7 646 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 FAM20AQ96MK3 541 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 CHRDQ9H2X0 955 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 KCNH3Q9ULD8 1083 aa21.11■□□□□ 0.97
HMGCS1-206ENST00000511774 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 DKC1O60832 514 aaKnown RBP eCLIP21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 RHOP08100 348 aa21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 RPS6KB1P23443 525 aa21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 GRM2Q14416 872 aa21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 NCAPH2Q6IBW4 605 aa21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 FAM126AQ9BYI3 521 aaPredicted RBP21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 KCNJ14Q9UNX9 436 aa21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 MRPS23Q9Y3D9 190 aaKnown RBP21.1■□□□□ 0.97
HMGCS1-206ENST00000511774 NCAM2O15394 837 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 SLITRK3O94933 977 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 EVCP57679 992 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 DMWDQ09019 674 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 GAS6Q14393 721 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 BMP2KLQ5H9B9 411 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 LAIR1Q6GTX8 287 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 CD300LGQ6UXG3 332 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 OTUD6AQ7L8S5 288 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 HACE1Q8IYU2 909 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 NETO1Q8TDF5 533 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 TCEAL4Q96EI5 215 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 ZSWIM4Q9H7M6 989 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 USP20Q9Y2K6 914 aa21.09■□□□□ 0.97
HMGCS1-206ENST00000511774 A0A087WWV3 80 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 DTNBO60941 627 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 HOXC13P31276 330 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 NCBP1Q09161 790 aaKnown RBP21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 SRSF5Q13243 272 aaKnown RBP21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 TFDP1Q14186 410 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 UVSSAQ2YD98 709 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 NFKBIZQ9BYH8 718 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 SNTG2Q9NY99 539 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 MTRRQ9UBK8 725 aa21.08■□□□□ 0.97
HMGCS1-206ENST00000511774 NCANO14594 1321 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 HRO43593 1189 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 EDN1P05305 212 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 FGFR3P22607 806 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 SATB1Q01826 763 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 SSRP1Q08945 709 aaKnown RBP21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 TOB2Q14106 344 aaPredicted RBP21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 EARS2Q5JPH6 523 aaKnown RBP21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 PPP4R3AQ6IN85 833 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 MAMSTRQ6ZN01 415 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 PRR23BQ6ZRT6 265 aa21.07■□□□□ 0.96
HMGCS1-206ENST00000511774 KRT25Q7Z3Z0 450 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms