RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 PIGRP01833 764 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 STAT6P42226 847 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 SMAD2Q15796 467 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 SLC10A6Q3KNW5 377 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 ZC2HC1CQ53FD0 456 aaPredicted RBP17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 ANKRD54Q6NXT1 300 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 SYCE2Q6PIF2 218 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 ZMAT2Q96NC0 199 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 RXFP1Q9HBX9 757 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 KBTBD4Q9NVX7 518 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 HCFC2Q9Y5Z7 792 aa17.66■□□□□ 0.42
PDLIM5-216ENST00000511767 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 CASTOR2A6NHX0 329 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 TBCAO75347 108 aaKnown RBP17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 CNPP09543 421 aaKnown RBP17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 KCNE1P15382 129 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 YARSP54577 528 aaKnown RBP17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 DSG1Q02413 1049 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 SMAD4Q13485 552 aaKnown RBP17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 SEZ6Q53EL9 994 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 DCLRE1AQ6PJP8 1040 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 GPR65Q8IYL9 337 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 STAMQ92783 540 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 CHAMP1Q96JM3 812 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 HERC2P3Q9BVR0 1158 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 ADAM28Q9UKQ2 775 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 FAM50BQ9Y247 325 aa17.65■□□□□ 0.42
PDLIM5-216ENST00000511767 TRIP11Q15643 1979 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 FRMD3A2A2Y4 597 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 ANKRD63C9JTQ0 380 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 K7ENM7 598 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 PPP1R37O75864 691 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 HOXB8P17481 243 aaPredicted RBP17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 GAP43P17677 238 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 ME1P48163 572 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 USP41Q3LFD5 358 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 HERC4Q5GLZ8 1057 aaPredicted RBP17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 GLRA4Q5JXX5 417 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 LLGL2Q6P1M3 1020 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 FUT10Q6P4F1 479 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 SLC39A4Q6P5W5 647 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 SFR1Q86XK3 245 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 IQUBQ8NA54 791 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 SMRP1Q8NCR6 262 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 TOPORSQ9NS56 1045 aaPredicted RBP17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 SEL1LQ9UBV2 794 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 SSX2IPQ9Y2D8 614 aa17.64■□□□□ 0.41
PDLIM5-216ENST00000511767 TDRD15B5MCY1 1934 aaKnown RBP17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 A0A0B4J269 797 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 C19orf67A6NJJ6 358 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 FAM189A1O60320 539 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 ADRB2P07550 413 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 CLTAP09496 248 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 HARSP12081 509 aaKnown RBP17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 ABCD1P33897 745 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 CA8P35219 290 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 LIG4P49917 911 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 SOX4Q06945 474 aaPredicted RBP17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 NOLC1Q14978 699 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 UPP1Q16831 310 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 RESP18Q5W5W9 173 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 MAP4K3Q8IVH8 894 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 TMEM87AQ8NBN3 555 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 SUSD6Q92537 303 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 CASP10Q92851 521 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 BICD1Q96G01 975 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 B3GALT6Q96L58 329 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 EMILIN2Q9BXX0 1053 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 CUEDC2Q9H467 287 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 PLEKHA5Q9HAU0 1116 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 PANK4Q9NVE7 773 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 TBC1D7Q9P0N9 293 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 ANKFY1Q9P2R3 1169 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 PRKAG3Q9UGI9 489 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 STYXL1Q9Y6J8 313 aa17.63■□□□□ 0.41
PDLIM5-216ENST00000511767 TTC26A0AVF1 554 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 C2CD2LO14523 706 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 TEX28O15482 410 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 POLR2DO15514 142 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 EPCAMP16422 314 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 KLRC2P26717 231 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 GLUD2P49448 558 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 CLCNKBP51801 687 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 KCNA1Q09470 495 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 BECN1Q14457 450 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 ZBTB6Q15916 424 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 KIAA1841Q6NSI8 718 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 PPFIBP1Q86W92 1011 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 GJD3Q8N144 294 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 LEO1Q8WVC0 666 aaPredicted RBP17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 DHX58Q96C10 678 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 DDX27Q96GQ7 796 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 SNX27Q96L92 541 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 LRRC27Q9C0I9 530 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 IKZF4Q9H2S9 585 aa17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 MRPL44Q9H9J2 332 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-216ENST00000511767 CNTN3Q9P232 1028 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms