RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SAMM50Q9Y512 469 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 PCDHA2Q9Y5H9 948 aa13.84□□□□□ -0.19
HMGB2-205ENST00000511316 FAM86B1E9PN63 330 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 MEIS1O00470 390 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 KRIT1O00522 736 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 SLC37A4O43826 429 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 CEP104O60308 925 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 EVI5O60447 810 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 CYP3A4P08684 503 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 FAM86B2P0C5J1 330 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 FAM153BP0C7A2 387 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 UCHL3P15374 230 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 KCNA2P16389 499 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 GAP43P17677 238 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 ITGB8P26012 769 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 SLC8A1P32418 973 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 GUCY2FP51841 1108 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 DRG2P55039 364 aaKnown RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 RTP1P59025 263 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 TLE2Q04725 743 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 FAM153CQ494X1 144 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 LACTB2Q53H82 288 aaPredicted RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 ODF2Q5BJF6 829 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 KCTD16Q68DU8 428 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 OR6J1Q8NGC5 347 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 SENP7Q9BQF6 1050 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 SPC25Q9HBM1 224 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 FAM153AQ9UHL3 310 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 SLC12A6Q9UHW9 1150 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 UBE4BO95155 1302 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 IGLV3-22A0A075B6J6 115 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 TRIM43BA6NCK2 446 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 POTEMA6NI47 508 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 TDP2O95551 362 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 GH1P01241 217 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 ARP10275 920 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 NR2F2P24468 414 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 PSMC6P62333 389 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 BYSLQ13895 437 aaKnown RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 KNOP1Q1ED39 458 aaKnown RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 RNF187Q5TA31 235 aaPredicted RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 STXBP4Q6ZWJ1 553 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 IRF2BP2Q7Z5L9 587 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 GPBP1Q86WP2 473 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 SH2D3CQ8N5H7 860 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 TPCN2Q8NHX9 752 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 PPTC7Q8NI37 304 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 HPS3Q969F9 1004 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 TRIM43Q96BQ3 446 aaPredicted RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 MBOAT7Q96N66 472 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 TOX2Q96NM4 488 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 CARD9Q9H257 536 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 KDM4CQ9H3R0 1056 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 STARD7Q9NQZ5 370 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 TYW1Q9NV66 732 aaKnown RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 AMFRQ9UKV5 643 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 NOC2LQ9Y3T9 749 aaKnown RBP13.83□□□□□ -0.2
HMGB2-205ENST00000511316 NFS1Q9Y697 457 aa13.83□□□□□ -0.2
HMGB2-205ENST00000511316 NCANO14594 1321 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 CCDC169A6NNP5 214 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 ARVCFO00192 962 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 KIF1CO43896 1103 aaKnown RBP13.82□□□□□ -0.2
HMGB2-205ENST00000511316 GGPS1O95749 300 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 CD4P01730 458 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 MMP3P08254 477 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 GSTA1P08263 222 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 STAT1P42224 750 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 ARHGAP4P98171 946 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 ZNF844Q08AG5 666 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 LAMC2Q13753 1193 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 NEDD9Q14511 834 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 C7orf61Q8IZ16 206 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 SCFD1Q8WVM8 642 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 LENG9Q96B70 501 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 GPRASP2Q96D09 838 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 MXRA8Q9BRK3 442 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 KCNH7Q9NS40 1196 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 KLC4Q9NSK0 619 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 NENFQ9UMX5 172 aa13.82□□□□□ -0.2
HMGB2-205ENST00000511316 SCN10AQ9Y5Y9 1956 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 SORBS3O60504 671 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 RASSF9O75901 435 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 NUDT17P0C025 328 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 CIITAP33076 1130 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 CPT1AP50416 773 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 PTK2Q05397 1052 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 CEP55Q53EZ4 464 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 PRPF38BQ5VTL8 546 aaKnown RBP13.81□□□□□ -0.2
HMGB2-205ENST00000511316 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 FAM126BQ8IXS8 530 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 PPP1R13LQ8WUF5 828 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 HES6Q96HZ4 224 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms