RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 HTR4Q13639 388 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 RAB33AQ14088 237 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 PSMD5Q16401 504 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 UVSSAQ2YD98 709 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 SPECC1Q5M775 1068 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 CDCA2Q69YH5 1023 aaPredicted RBP9.19□□□□□ -0.94
TRIO-217ENST00000511019 APBB1IPQ7Z5R6 666 aaPredicted RBP9.19□□□□□ -0.94
TRIO-217ENST00000511019 ST13P5Q8NFI4 369 aaPredicted RBP9.19□□□□□ -0.94
TRIO-217ENST00000511019 IFT74Q96LB3 600 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 RPP25Q9BUL9 199 aaKnown RBP9.19□□□□□ -0.94
TRIO-217ENST00000511019 TBC1D17Q9HA65 648 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 ARHGEF3Q9NR81 526 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 SLC2A4RGQ9NR83 387 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 FBXW11Q9UKB1 542 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 USP20Q9Y2K6 914 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 GDAQ9Y2T3 454 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 NUMBLQ9Y6R0 609 aa9.19□□□□□ -0.94
TRIO-217ENST00000511019 C5orf42Q9H799 3197 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 DCNP07585 359 aaKnown RBP9.18□□□□□ -0.94
TRIO-217ENST00000511019 OR52Z1P0C646 297 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 MUTP22033 750 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 FGFR3P22607 806 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 HOXA9P31269 272 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 NTHL1P78549 312 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 ORC2Q13416 577 aaPredicted RBP9.18□□□□□ -0.94
TRIO-217ENST00000511019 GNL2Q13823 731 aaKnown RBP9.18□□□□□ -0.94
TRIO-217ENST00000511019 PDIA5Q14554 519 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 NAB2Q15742 525 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 DCAF4L1Q3SXM0 396 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 AXDND1Q5T1B0 1012 aaPredicted RBP9.18□□□□□ -0.94
TRIO-217ENST00000511019 EEF1DP3Q658K8 133 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 PARM1Q6UWI2 310 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.18□□□□□ -0.94
TRIO-217ENST00000511019 MTSS1LQ765P7 747 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 RTL10Q7L3V2 364 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 BSNDQ8WZ55 320 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 KIFAP3Q92845 792 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 FGF13Q92913 245 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 C8orf76Q96K31 380 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 UROC1Q96N76 676 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 CXCL16Q9H2A7 254 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 FOXP1Q9H334 677 aaPredicted RBP9.18□□□□□ -0.94
TRIO-217ENST00000511019 POLD4Q9HCU8 107 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 LRWD1Q9UFC0 647 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 LIMCH1Q9UPQ0 1083 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 STK24Q9Y6E0 443 aa9.18□□□□□ -0.94
TRIO-217ENST00000511019 TMEM189-UBE2V1I3L0A0 370 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 CCL16O15467 120 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 ADAM12O43184 909 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 LMNAP02545 664 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 CCT6AP40227 531 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 ID4P47928 161 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 RBM25P49756 843 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 CLCNKBP51801 687 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 YARSP54577 528 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 STARD6P59095 220 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 SNW1Q13573 536 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 SLC44A4Q53GD3 710 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 TTC38Q5R3I4 469 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 NT5DC1Q5TFE4 455 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 ATF7IP2Q5U623 682 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 HAUS3Q68CZ6 603 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 ANKS3Q6ZW76 656 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 C1orf210Q8IVY1 113 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 FAM184AQ8NB25 1140 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 ITFG1Q8TB96 612 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 SLC7A14Q8TBB6 771 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 FGF14Q92915 247 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 LLPHQ9BRT6 129 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 CCDC94Q9BW85 323 aaPredicted RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 CCDC113Q9H0I3 377 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 BHMT2Q9H2M3 363 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 NOL7Q9UMY1 257 aaKnown RBP9.17□□□□□ -0.94
TRIO-217ENST00000511019 KIAA1024Q9UPX6 916 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 BACE2Q9Y5Z0 518 aa9.17□□□□□ -0.94
TRIO-217ENST00000511019 PIEZO1Q92508 2521 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 SMIM28A0A1B0GU29 152 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 KANSL1LA0AUZ9 987 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 CCDC169A6NNP5 214 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 SP9P0CG40 484 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 PTPN2P17706 415 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 ELF1P32519 619 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 FXR2P51116 673 aaKnown RBP eCLIP9.16□□□□□ -0.943e-10■□□□□ 10
TRIO-217ENST00000511019 PEX3P56589 373 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 PFKPQ01813 784 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 PRKCQQ04759 706 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 ECM1Q16610 540 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 UPP1Q16831 310 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 PABPC1LQ4VXU2 614 aaKnown RBP9.16□□□□□ -0.94
TRIO-217ENST00000511019 GLRA4Q5JXX5 417 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 ZC3H14Q6PJT7 736 aaKnown RBP9.16□□□□□ -0.94
TRIO-217ENST00000511019 ERMP1Q7Z2K6 904 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 CCDC83Q8IWF9 413 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 FBXO18Q8NFZ0 1043 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 PJA1Q8NG27 643 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 BORCS6Q96GS4 357 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 PPP1R10Q96QC0 940 aaKnown RBP9.16□□□□□ -0.94
TRIO-217ENST00000511019 NELL2Q99435 816 aa9.16□□□□□ -0.94
TRIO-217ENST00000511019 TCHPQ9BT92 498 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms