RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 ZNF528Q3MIS6 628 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 RSPO2Q6UXX9 243 aaPredicted RBP11.51□□□□□ -0.57
DDX41-211ENST00000510171 RTL10Q7L3V2 364 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 MCPH1Q8NEM0 835 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 ITFG1Q8TB96 612 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 SLC7A14Q8TBB6 771 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 TNFRSF25Q93038 417 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 DDX23Q9BUQ8 820 aaKnown RBP11.51□□□□□ -0.57
DDX41-211ENST00000510171 OSBPL6Q9BZF3 934 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 GPRC5CQ9NQ84 441 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 SNTG2Q9NY99 539 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 FBXO4Q9UKT5 387 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 KCNH3Q9ULD8 1083 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 PTGESO14684 152 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 NEMFO60524 1076 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 RECQL4O94761 1208 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 CTDNEP1O95476 244 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 POU2F2P09086 479 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 OR1D2P34982 312 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 CSTF1Q05048 431 aaKnown RBP11.5□□□□□ -0.57
DDX41-211ENST00000510171 PRPF4BQ13523 1007 aaKnown RBP11.5□□□□□ -0.57
DDX41-211ENST00000510171 MAPK6Q16659 721 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 CDCA2Q69YH5 1023 aaPredicted RBP11.5□□□□□ -0.57
DDX41-211ENST00000510171 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.5□□□□□ -0.57
DDX41-211ENST00000510171 NOSTRINQ8IVI9 506 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 SUMF1Q8NBK3 374 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 ATRIPQ8WXE1 791 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 MTMR9Q96QG7 549 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 NELL2Q99435 816 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 ADPGKQ9BRR6 497 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 PDZD7Q9H5P4 517 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
DDX41-211ENST00000510171 DNMT3BQ9UBC3 853 aaKnown RBP11.5□□□□□ -0.57
DDX41-211ENST00000510171 MTF2Q9Y483 593 aaPredicted RBP11.5□□□□□ -0.57
DDX41-211ENST00000510171 DENND4AQ7Z401 1863 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 BTBD18B2RXH4 712 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 ACKR2O00590 384 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 NCAM2O15394 837 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 B3GAT3O94766 335 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 SPATA31C1P0DKV0 1188 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 FDPSP14324 419 aaKnown RBP11.49□□□□□ -0.57
DDX41-211ENST00000510171 LIG1P18858 919 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 FGFR3P22607 806 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 MAGEA9P43362 315 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 ANKRD1Q15327 319 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 PABPC1LQ4VXU2 614 aaKnown RBP11.49□□□□□ -0.57
DDX41-211ENST00000510171 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
DDX41-211ENST00000510171 ZBTB41Q5SVQ8 909 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 NPAS3Q8IXF0 933 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 NACC1Q96RE7 527 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 KXD1Q9BQD3 176 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 CXCL16Q9H2A7 254 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 TUFT1Q9NNX1 390 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 LTB4R2Q9NPC1 389 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 HCFC1R1Q9NWW0 138 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 MTRRQ9UBK8 725 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 DAXXQ9UER7 740 aaPredicted RBP11.49□□□□□ -0.57
DDX41-211ENST00000510171 MRPS23Q9Y3D9 190 aaKnown RBP11.49□□□□□ -0.57
DDX41-211ENST00000510171 PCDHGA2Q9Y5H1 932 aa11.49□□□□□ -0.57
DDX41-211ENST00000510171 SPTLC1O15269 473 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 TRAPPC3O43617 180 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 PRKCBP05771 671 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 CYP11B2P19099 503 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 CD72P21854 359 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 SDHBP21912 280 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 TRIM29Q14134 588 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 NAB2Q15742 525 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 RSPO4Q2I0M5 234 aaPredicted RBP11.48□□□□□ -0.57
DDX41-211ENST00000510171 ZNF852Q6ZMS4 543 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 TPRG1Q6ZUI0 275 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 ANKS3Q6ZW76 656 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 CATSPER3Q86XQ3 398 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 GPR161Q8N6U8 529 aaKnown RBP11.48□□□□□ -0.57
DDX41-211ENST00000510171 ING5Q8WYH8 240 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 SECISBP2LQ93073 1101 aaKnown RBP11.48□□□□□ -0.57
DDX41-211ENST00000510171 MCRS1Q96EZ8 462 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 GDE1Q9NZC3 331 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 NCDNQ9UBB6 729 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 USP20Q9Y2K6 914 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 MRPS17Q9Y2R5 130 aaKnown RBP11.48□□□□□ -0.57
DDX41-211ENST00000510171 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 BACE2Q9Y5Z0 518 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 CDY1Q9Y6F8 540 aa11.48□□□□□ -0.57
DDX41-211ENST00000510171 MYO15AQ9UKN7 3530 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 GVINP1Q7Z2Y8 2422 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 WNT7AO00755 349 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 MED24O75448 989 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 ECI2O75521 394 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 RHOP08100 348 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 NAMPTP43490 491 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 RBM25P49756 843 aaKnown RBP11.47□□□□□ -0.57
DDX41-211ENST00000510171 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 EEF1DP3Q658K8 133 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms