RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TUFT1Q9NNX1 390 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 SLC2A4RGQ9NR83 387 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 PRMT7Q9NVM4 692 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-202ENST00000509637 ZMYM2Q9UBW7 1377 aa17.6■□□□□ 0.41
RAB40C-202ENST00000509637 GPR179Q6PRD1 2367 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 I3L4J1 428 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 CYP11B2P19099 503 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 FSHRP23945 695 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 SOX4Q06945 474 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-202ENST00000509637 NBR1Q14596 966 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 PSMD5Q16401 504 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 GLRA4Q5JXX5 417 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 PADI6Q6TGC4 694 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 CEP120Q8N960 986 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 POLR3CQ9BUI4 534 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-202ENST00000509637 GOLGA2P5Q9HBQ8 144 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.59■□□□□ 0.415e-8■■■■□ 19.6
RAB40C-202ENST00000509637 DNMT3BQ9UBC3 853 aaKnown RBP17.59■□□□□ 0.41
RAB40C-202ENST00000509637 GDAQ9Y2T3 454 aa17.59■□□□□ 0.41
RAB40C-202ENST00000509637 SF3B1O75533 1304 aaKnown RBP eCLIP17.58■□□□□ 0.41e-6■■■■■ 94.1
RAB40C-202ENST00000509637 STK25O00506 426 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 ACKR2O00590 384 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 NR1I2O75469 434 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 PRKCBP05771 671 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 THP07101 528 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 LIG1P18858 919 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 FGFR3P22607 806 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 PHLDB3Q6NSJ2 640 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 TAS1R3Q7RTX0 852 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 FGF13Q92913 245 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 NXPE3Q969Y0 559 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 PRIMPOLQ96LW4 560 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 PPP1R10Q96QC0 940 aaKnown RBP17.58■□□□□ 0.4
RAB40C-202ENST00000509637 PLA2G2FQ9BZM2 168 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 ARHGEF3Q9NR81 526 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 CDH7Q9ULB5 785 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 OTOGLQ3ZCN5 2332 aa17.58■□□□□ 0.4
RAB40C-202ENST00000509637 N4BP3O15049 544 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 C8AP07357 584 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 SP9P0CG40 484 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 RPA1P27694 616 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 OR1D2P34982 312 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 BRCC3P46736 316 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 NEK4P51957 841 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 STARD6P59095 220 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 PRPF4BQ13523 1007 aaKnown RBP17.57■□□□□ 0.4
RAB40C-202ENST00000509637 RAB33AQ14088 237 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 ANKRD1Q15327 319 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 DCLRE1AQ6PJP8 1040 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 HACE1Q8IYU2 909 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 DAW1Q8N136 415 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 NACC1Q96RE7 527 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 BRMS1Q9HCU9 246 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 DPP7Q9UHL4 492 aa17.57■□□□□ 0.4
RAB40C-202ENST00000509637 TKTP29401 623 aaKnown RBP17.56■□□□□ 0.4
RAB40C-202ENST00000509637 CLCNKBP51801 687 aa17.56■□□□□ 0.4
RAB40C-202ENST00000509637 SNW1Q13573 536 aaKnown RBP17.56■□□□□ 0.4
RAB40C-202ENST00000509637 SLC5A9Q2M3M2 681 aa17.56■□□□□ 0.4
RAB40C-202ENST00000509637 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
RAB40C-202ENST00000509637 DCLK2Q8N568 766 aa17.56■□□□□ 0.4
RAB40C-202ENST00000509637 MCPH1Q8NEM0 835 aa17.56■□□□□ 0.4
RAB40C-202ENST00000509637 SLC7A14Q8TBB6 771 aa17.56■□□□□ 0.4
RAB40C-202ENST00000509637 DDX27Q96GQ7 796 aaKnown RBP17.56■□□□□ 0.4
RAB40C-202ENST00000509637 ZMAT2Q96NC0 199 aaKnown RBP17.56■□□□□ 0.4
RAB40C-202ENST00000509637 DDX23Q9BUQ8 820 aaKnown RBP17.56■□□□□ 0.4
RAB40C-202ENST00000509637 MTRRQ9UBK8 725 aa17.56■□□□□ 0.4
RAB40C-202ENST00000509637 SIT1Q9Y3P8 196 aa17.56■□□□□ 0.4
RAB40C-202ENST00000509637 ABLIM1O14639 778 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 HNRNPA1P09651 372 aaKnown RBP eCLIP17.55■□□□□ 0.4
RAB40C-202ENST00000509637 CD72P21854 359 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 NAMPTP43490 491 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 TOB1P50616 345 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-202ENST00000509637 IL17AQ16552 155 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 MAPK6Q16659 721 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 PPM1LQ5SGD2 360 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 ALKAL1Q6UXT8 129 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 ZBTB8OSQ8IWT0 167 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 NPAS3Q8IXF0 933 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 PJA1Q8NG27 643 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 ING5Q8WYH8 240 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 RMDN1Q96DB5 314 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 KXD1Q9BQD3 176 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 PTPRHQ9HD43 1115 aa17.55■□□□□ 0.4
RAB40C-202ENST00000509637 TMEM189-UBE2V1I3L0A0 370 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 OR52Z1P0C646 297 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 MAPK7Q13164 816 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 FZD5Q13467 585 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 UPP1Q16831 310 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 XKR4Q5GH76 650 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 C1orf210Q8IVY1 113 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 CCDC43Q96MW1 224 aaKnown RBP17.54■□□□□ 0.4
RAB40C-202ENST00000509637 POLIQ9UNA4 740 aa17.54■□□□□ 0.4
RAB40C-202ENST00000509637 SMIM28A0A1B0GU29 152 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 ARHGEF35A5YM69 484 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 PP2D1A8MPX8 630 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 TBC1D4O60343 1298 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 HOXA9P31269 272 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 ID4P47928 161 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 SLC44A4Q53GD3 710 aa17.53■□□□□ 0.4
RAB40C-202ENST00000509637 ELMSAN1Q6PJG2 1045 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms