RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 HDAC7Q8WUI4 952 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 NKD2Q969F2 451 aaPredicted RBP12.02□□□□□ -0.49
RNF4-212ENST00000509258 PRIMPOLQ96LW4 560 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 RTP3Q9BQQ7 232 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 RXFP1Q9HBX9 757 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.49
RNF4-212ENST00000509258 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.02□□□□□ -0.49
RNF4-212ENST00000509258 ZMYM2Q9UBW7 1377 aa12.02□□□□□ -0.49
RNF4-212ENST00000509258 VPS13AQ96RL7 3174 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 VWA3AA6NCI4 1184 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 ABLIM1O14639 778 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 KIF4AO95239 1232 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 C1RP00736 705 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 SPATA31D3P0C874 917 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 NPR3P17342 541 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 NPTX2P47972 431 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 PEX3P56589 373 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 RAD51AP2Q09MP3 1159 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 GRIK3Q13003 919 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 ZRSR1Q15695 479 aaKnown RBP12.01□□□□□ -0.49
RNF4-212ENST00000509258 MAPK6Q16659 721 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 GLRA4Q5JXX5 417 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 FUT10Q6P4F1 479 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 PRSS55Q6UWB4 352 aaPredicted RBP12.01□□□□□ -0.49
RNF4-212ENST00000509258 CD300LGQ6UXG3 332 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 SPATA31D4Q6ZUB0 917 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 FRMD5Q7Z6J6 570 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 ZBTB8OSQ8IWT0 167 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 GPR65Q8IYL9 337 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 SMG7Q92540 1137 aaKnown RBP12.01□□□□□ -0.49
RNF4-212ENST00000509258 C2orf40Q9H1Z8 148 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 CHST7Q9NS84 486 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 EPS15L1Q9UBC2 864 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 GDAQ9Y2T3 454 aa12.01□□□□□ -0.49
RNF4-212ENST00000509258 N4BP3O15049 544 aa12□□□□□ -0.49
RNF4-212ENST00000509258 ADAM12O43184 909 aa12□□□□□ -0.49
RNF4-212ENST00000509258 N4BP1O75113 896 aaKnown RBP12□□□□□ -0.49
RNF4-212ENST00000509258 RFPL2O75678 378 aa12□□□□□ -0.49
RNF4-212ENST00000509258 PAPLNO95428 1278 aa12□□□□□ -0.49
RNF4-212ENST00000509258 RFX1P22670 979 aa12□□□□□ -0.49
RNF4-212ENST00000509258 FOXK2Q01167 660 aa12□□□□□ -0.49
RNF4-212ENST00000509258 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
RNF4-212ENST00000509258 CUL4AQ13619 759 aa12□□□□□ -0.49
RNF4-212ENST00000509258 TMEM132AQ24JP5 1023 aa12□□□□□ -0.49
RNF4-212ENST00000509258 USP41Q3LFD5 358 aa12□□□□□ -0.49
RNF4-212ENST00000509258 TMEM119Q4V9L6 283 aa12□□□□□ -0.49
RNF4-212ENST00000509258 ARSHQ5FYA8 562 aa12□□□□□ -0.49
RNF4-212ENST00000509258 RTP2Q5QGT7 225 aa12□□□□□ -0.49
RNF4-212ENST00000509258 HYIQ5T013 277 aa12□□□□□ -0.49
RNF4-212ENST00000509258 DTHD1Q6ZMT9 781 aa12□□□□□ -0.49
RNF4-212ENST00000509258 GLYCTKQ8IVS8 523 aa12□□□□□ -0.49
RNF4-212ENST00000509258 DTWD2Q8NBA8 298 aa12□□□□□ -0.49
RNF4-212ENST00000509258 KIFAP3Q92845 792 aa12□□□□□ -0.49
RNF4-212ENST00000509258 NXPE3Q969Y0 559 aa12□□□□□ -0.49
RNF4-212ENST00000509258 ZBTB45Q96K62 511 aaPredicted RBP12□□□□□ -0.49
RNF4-212ENST00000509258 CDT1Q9H211 546 aa12□□□□□ -0.49
RNF4-212ENST00000509258 PIDD1Q9HB75 910 aa12□□□□□ -0.49
RNF4-212ENST00000509258 GOLGA2P5Q9HBQ8 144 aa12□□□□□ -0.49
RNF4-212ENST00000509258 PTPRHQ9HD43 1115 aa12□□□□□ -0.49
RNF4-212ENST00000509258 ZDHHC7Q9NXF8 308 aa12□□□□□ -0.49
RNF4-212ENST00000509258 ARHGAP28Q9P2N2 729 aa12□□□□□ -0.49
RNF4-212ENST00000509258 WNT16Q9UBV4 365 aa12□□□□□ -0.49
RNF4-212ENST00000509258 ADAM28Q9UKQ2 775 aa12□□□□□ -0.49
RNF4-212ENST00000509258 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
RNF4-212ENST00000509258 SCN1AP35498 2009 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 LAD1O00515 517 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 SLC16A4O15374 487 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 TGM5O43548 720 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 NARSO43776 548 aaKnown RBP11.99□□□□□ -0.49
RNF4-212ENST00000509258 CFHP08603 1231 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 SRFP11831 508 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 SLC12A3P55017 1021 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 SOX4Q06945 474 aaPredicted RBP11.99□□□□□ -0.49
RNF4-212ENST00000509258 TUSC3Q13454 348 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 HSP90AA2PQ14568 343 aaPredicted RBP11.99□□□□□ -0.49
RNF4-212ENST00000509258 ANGPT1Q15389 498 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 RILPL1Q5EBL4 403 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 ATF7IP2Q5U623 682 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 KRT79Q5XKE5 535 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 C3orf58Q8NDZ4 430 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 ZNF707Q96C28 371 aaPredicted RBP11.99□□□□□ -0.49
RNF4-212ENST00000509258 PPP1R10Q96QC0 940 aaKnown RBP11.99□□□□□ -0.49
RNF4-212ENST00000509258 ACO2Q99798 780 aaKnown RBP11.99□□□□□ -0.49
RNF4-212ENST00000509258 ADPGKQ9BRR6 497 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 TARS2Q9BW92 718 aaKnown RBP11.99□□□□□ -0.49
RNF4-212ENST00000509258 HAPLN2Q9GZV7 340 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.99□□□□□ -0.49
RNF4-212ENST00000509258 FNIP2Q9P278 1114 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 DNM3Q9UQ16 869 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 SF3B1O75533 1304 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■■■■ 109.1
RNF4-212ENST00000509258 COL4A3Q01955 1670 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 TSC2P49815 1807 aa11.99□□□□□ -0.49
RNF4-212ENST00000509258 PHLPP2Q6ZVD8 1323 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 CCDC169A6NNP5 214 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 H3BQV1 296 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 I3L4J1 428 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 PI15O43692 258 aa11.98□□□□□ -0.49
RNF4-212ENST00000509258 TADA2AO75478 443 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms