RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, human

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF4-211	ENST00000509206	WNT7B	P56706	349 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	RAB15	P59190	212 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	HAND2	P61296	217 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	GHRHR	Q02643	423 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	CREM	Q03060	361 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	GRM2	Q14416	872 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	ZNF423	Q2M1K9	1284 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	USP41	Q3LFD5	358 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	PABPC1L	Q4VXU2	614 aa	Known RBP	4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	DGKK	Q5KSL6	1271 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	VPS53	Q5VIR6	699 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	C1orf228	Q6PIY5	440 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	VASH1	Q7L8A9	365 aa	Predicted RBP	4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	ZNF280B	Q86YH2	543 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	HDDC3	Q8N4P3	179 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	ITFG1	Q8TB96	612 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	ING5	Q8WYH8	240 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	ZNF668	Q96K58	619 aa	Predicted RBP	4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	HERC2P3	Q9BVR0	1158 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	COLEC11	Q9BWP8	271 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	RXFP1	Q9HBX9	757 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	ZFP14	Q9HCL3	533 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	CHST12	Q9NRB3	414 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	GDE1	Q9NZC3	331 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	DNAJB4	Q9UDY4	337 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	TCEAL9	Q9UHQ7	104 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	ANAPC4	Q9UJX5	808 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	KCNH3	Q9ULD8	1083 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	CEP131	Q9UPN4	1083 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	RAX	Q9Y2V3	346 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	PCDHGA11	Q9Y5H2	935 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	NBEA	Q8NFP9	2946 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	MYO18B	Q8IUG5	2567 aa		4.36	□□□□□ -1.71
RNF4-211	ENST00000509206	BPTF	Q12830	3046 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	SPDYE3	A6NKU9	549 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	SFI1	A8K8P3	1242 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206		K7ESF4	209 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	OPLAH	O14841	1288 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	MAGEB2	O15479	319 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	GPR32	O75388	356 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	OFD1	O75665	1012 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	AKAP3	O75969	853 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	PAPSS2	O95340	614 aa	Predicted RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	POMC	P01189	267 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	C8A	P07357	584 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	CHRNB1	P11230	501 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	PC	P11498	1178 aa	Known RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	KCNA2	P16389	499 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	FGFR4	P22455	802 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	SFPQ	P23246	707 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	KIF5B	P33176	963 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	MAPK8	P45983	427 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	RAB27A	P51159	221 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	ACTR2	P61160	394 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	SKOR1	P84550	965 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	CDC42EP1	Q00587	391 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	DSG1	Q02413	1049 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	LMAN2	Q12907	356 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	TANGO2	Q6ICL3	276 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	EFCAB12	Q6NXP0	572 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	TAS1R1	Q7RTX1	841 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	CYP4X1	Q8N118	509 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	EHBP1	Q8NDI1	1231 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	TPCN2	Q8NHX9	752 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	MDM1	Q8TC05	714 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	PIBF1	Q8WXW3	757 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	ELSPBP1	Q96BH3	223 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	MSANTD3	Q96H12	275 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	PIGS	Q96S52	555 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	PCYT2	Q99447	389 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	UBAC1	Q9BSL1	405 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	VN1R3	Q9BXE9	311 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	NUSAP1	Q9BXS6	441 aa	Known RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	PLA2G2F	Q9BZM2	168 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	INO80B	Q9C086	356 aa	Predicted RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	ZNF302	Q9NR11	478 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	RBM12	Q9NTZ6	932 aa	Known RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	PIN4	Q9Y237	131 aa	Known RBP	4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	MAP4K5	Q9Y4K4	846 aa		4.35	□□□□□ -1.71
RNF4-211	ENST00000509206	USP9X	Q93008	2570 aa	Predicted RBP	4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	CCDC163	A0A0D9SF12	145 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	PNMA6F	A0A0J9YX94	578 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	LNP1	A1A4G5	178 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	TTC24	A2A3L6	582 aa	Predicted RBP	4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	BCLAF3	A2AJT9	711 aa	Known RBP	4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	FAM187A	A6NFU0	413 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	ERVH48-1	M5A8F1	160 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	DDX39A	O00148	427 aa	Known RBP	4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	ZNF197	O14709	1029 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	ZNF213	O14771	459 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	ATXN7	O15265	892 aa	Predicted RBP	4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	SMARCA5	O60264	1052 aa	Predicted RBP	4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	PRMT3	O60678	531 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	PPP1R11	O60927	126 aa	Predicted RBP	4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	TADA2A	O75478	443 aa		4.34	□□□□□ -1.71
RNF4-211	ENST00000509206	DDHD2	O94830	711 aa		4.34	□□□□□ -1.71

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