RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 DSC3Q14574 896 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 SURF1Q15526 300 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 SLC10A6Q3KNW5 377 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 SMG8Q8ND04 991 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 FAM84AQ96KN4 292 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 ADAM2Q99965 735 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 TMEM117Q9H0C3 514 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 TMEM8AQ9HCN3 771 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
SNCAIP-211ENST00000509023 LACTBL1A8MY62 500 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 IL18RAPO95256 599 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 AKAP5P24588 427 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 GTF2H1P32780 548 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 YARSP54577 528 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 KCNMA1Q12791 1236 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 ZNF516Q92618 1163 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 PCMTD1Q96MG8 357 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 PPP1R9BQ96SB3 815 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 PRDM5Q9NQX1 630 aaPredicted RBP16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 SIK3Q9Y2K2 1263 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 ITIH6Q6UXX5 1313 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 ANK1P16157 1881 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 TTC26A0AVF1 554 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 GTPBP10A4D1E9 387 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 RECQL4O94761 1208 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 PARNO95453 639 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 DEKP35659 375 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 PLEKHG4Q58EX7 1191 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 KRT39Q6A163 491 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 GBP6Q6ZN66 633 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 WDR49Q8IV35 697 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 PARP2Q9UGN5 583 aa16.06■□□□□ 0.16
SNCAIP-211ENST00000509023 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 SV2AQ7L0J3 742 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 EFCAB13Q8IY85 973 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 DBF4BQ8NFT6 615 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 OR5B17Q8NGF7 314 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 SNX27Q96L92 541 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 ASB7Q9H672 318 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 SCN5AQ14524 2016 aa16.05■□□□□ 0.16
SNCAIP-211ENST00000509023 CITO14578 2027 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 TRIM43BA6NCK2 446 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 P4HA2O15460 535 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 NFICP08651 508 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 RAB27AP51159 221 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 TFAMQ00059 246 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 CETN1Q12798 172 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 JADE1Q6IE81 842 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 C15orf39Q6ZRI6 1047 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 CD302Q8IX05 232 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 HACE1Q8IYU2 909 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 SEPT8Q92599 483 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 TRIM43Q96BQ3 446 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 LSM14BQ9BX40 385 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 FTHL17Q9BXU8 183 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 MTMR12Q9C0I1 747 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 PLEKHA5Q9HAU0 1116 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 RGS18Q9NS28 235 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 FAM207AQ9NSI2 230 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 RALGAPA2Q2PPJ7 1873 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 PMM2O15305 246 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 CXCL10P02778 98 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 C4BPAP04003 597 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 SLC9A1P19634 815 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 IBSPP21815 317 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 BIRC3Q13489 604 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 ZACNQ401N2 412 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 COL13A1Q5TAT6 717 aaPredicted RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 TDRD10Q5VZ19 366 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 LINC01599Q8WXQ3 324 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 APBB2Q92870 758 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 CXCL16Q9H2A7 254 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 KLK14Q9P0G3 267 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 IMPACTQ9P2X3 320 aa16.04■□□□□ 0.16
SNCAIP-211ENST00000509023 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 KIAA0355O15063 1070 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 ITGA4P13612 1032 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 TRIM21P19474 475 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 ITGB8P26012 769 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 PON1P27169 355 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 AP3M2P53677 418 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 TBX2Q13207 712 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 DUOXA2Q1HG44 320 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 EPC2Q52LR7 807 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 TRIM65Q6PJ69 517 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 ALKAL1Q6UXT8 129 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 DEFB128Q7Z7B8 93 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 TAS1R2Q8TE23 839 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 LPPQ93052 612 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 CNTN3Q9P232 1028 aa16.03■□□□□ 0.16
SNCAIP-211ENST00000509023 GOLGA6L6A8MZA4 724 aa16.02■□□□□ 0.16
SNCAIP-211ENST00000509023 EPHB6O15197 1021 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms