RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CCDC57Q2TAC2 916 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ZBTB41Q5SVQ8 909 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TTC22Q5TAA0 569 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CCDC62Q6P9F0 684 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 C11orf88Q6PI97 169 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RNF19BQ6ZMZ0 732 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RRM2BQ7LG56 351 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 STRA8Q7Z7C7 330 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 IGSF22Q8N9C0 903 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 GOT1L1Q8NHS2 421 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 MIPOL1Q8TD10 442 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 TBC1D20Q96BZ9 403 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PIDD1Q9HB75 910 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ATP6V0A4Q9HBG4 840 aa4.2□□□□□ -1.74
NEDD4-209ENST00000508871 ABI2Q9NYB9 513 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 PPARGC1AQ9UBK2 798 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 CCNL1Q9UK58 526 aaPredicted RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 RTCBQ9Y3I0 505 aaKnown RBP4.2□□□□□ -1.74
NEDD4-209ENST00000508871 SALL3Q9BXA9 1300 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 A0A0B4J269 797 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 A0A1W2PRU2 124 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 C9IYK1 514 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 PEX12O00623 359 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 CYP27B1O15528 508 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 POTEJP0CG39 1038 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ERCC2P18074 760 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 NNMTP40261 264 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TRPC1P48995 793 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF132P52740 706 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 MC1RQ01726 317 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 SCN1BQ07699 218 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 KLHL30Q0D2K2 578 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 GTF2H3Q13889 308 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 CCDC183Q5T5S1 534 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 MPRIPQ6WCQ1 1025 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 STK32CQ86UX6 486 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 KSR1Q8IVT5 923 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TUSC5Q8IXB3 177 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 FAM169BQ8N8A8 192 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 GDAP1Q8TB36 358 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 FCGR1BQ92637 280 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 COL26A1Q96A83 441 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TEX13BQ9BXU2 312 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 KLHL4Q9C0H6 718 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 MUC3BQ9H195 1237 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 NRXN2Q9P2S2 1712 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 RIC1Q4ADV7 1423 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ANO9A1A5B4 782 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 A8MXQ7 604 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 FCHO1O14526 889 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TBC1D4O60343 1298 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TNFRSF21O75509 655 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 CCT6AP40227 531 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 DCTN2Q13561 401 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TM4SF20Q53R12 229 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 WIPI1Q5MNZ9 446 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 NAA16Q6N069 864 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 RNF44Q7L0R7 432 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ATP11CQ8NB49 1132 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 SLC4A11Q8NBS3 891 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 RNF214Q8ND24 703 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 LINS1Q8NG48 757 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 RBM17Q96I25 401 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 PLA2G12BQ9BX93 195 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 UNKQ9C0B0 810 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 PHAXQ9H814 394 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ACAD9Q9H845 621 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 NSMCE4AQ9NXX6 385 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 GPRC5BQ9NZH0 403 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 XPO7Q9UIA9 1087 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TNS1Q9HBL0 1735 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 H3BQ06 376 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF263O14978 683 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 FFAR2O15552 330 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 MT-ND3P03897 115 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 C6orf222P0C671 652 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ITGA4P13612 1032 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 PRKCIP41743 596 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 SEPHS1P49903 392 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 MNX1P50219 401 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 LRRC23Q53EV4 343 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TOR2AQ5JU69 321 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 FAM26FQ5R3K3 315 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 NBPF12Q5TAG4 269 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 RUFY3Q7L099 469 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 THNSL1Q8IYQ7 743 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 EFHD1Q9BUP0 239 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 LACRTQ9GZZ8 138 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TNKS2Q9H2K2 1166 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 SUV39H2Q9H5I1 410 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 POLMQ9NP87 494 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TRMT13Q9NUP7 481 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ABCF3Q9NUQ8 709 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 DCAF16Q9NXF7 216 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TLR7Q9NYK1 1049 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 DUSP12Q9UNI6 340 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 SLC45A1Q9Y2W3 748 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 GPSM3Q9Y4H4 160 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 CDHR2Q9BYE9 1310 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms