RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 UBE4BO95155 1302 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 ANK1P16157 1881 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 SMIM28A0A1B0GU29 152 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 GOLGA6L4A6NEF3 574 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 NRP1O14786 923 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 ZNF202O95125 648 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 CTSAP10619 480 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 CYP3A5P20815 502 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 AKAP5P24588 427 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 DNAJB1P25685 340 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 SLC11A1P49279 550 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 ELAVL2Q12926 359 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 COASYQ13057 564 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 KCNB1Q14721 858 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 BMT2Q1RMZ1 405 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 AAK1Q2M2I8 961 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 SLC10A6Q3KNW5 377 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 DCLRE1AQ6PJP8 1040 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 CDR2LQ86X02 465 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 NT5DC4Q86YG4 428 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 FMR1NBQ8N0W7 255 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 PABPC5Q96DU9 382 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 ZBTB45Q96K62 511 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 ZFP42Q96MM3 310 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 HAPLN2Q9GZV7 340 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 ZHX3Q9H4I2 956 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 KIAA1586Q9HCI6 787 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 CHST7Q9NS84 486 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 SERTAD1Q9UHV2 236 aa11.57□□□□□ -0.56
POLR2J3-213ENST00000508848 BDP1A6H8Y1 2624 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 XPOTO43592 962 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 KLRC4O43908 158 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 LILRB3O75022 631 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 ZC3H11AO75152 810 aaKnown RBP eCLIP11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 GCNT3O95395 438 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 POMCP01189 267 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 LIG1P18858 919 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 SCNN1GP51170 649 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 ASIC1P78348 528 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 FAM160A1Q05DH4 1040 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 SNW1Q13573 536 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 KCNC3Q14003 757 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 MYBPC2Q14324 1141 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 ZC2HC1CQ53FD0 456 aaPredicted RBP11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 FAM26FQ5R3K3 315 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 SLC39A4Q6P5W5 647 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 KRBA2Q6ZNG9 492 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 C12orf56Q8IXR9 622 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 EFHBQ8N7U6 833 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 FSIP1Q8NA03 581 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 SPATA20Q8TB22 786 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 BICD1Q96G01 975 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 SNX27Q96L92 541 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 DNAJB4Q9UDY4 337 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 CPSF3Q9UKF6 684 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 INPP5FQ9Y2H2 1132 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 USP20Q9Y2K6 914 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 XIRP2A4UGR9 3374 aa11.56□□□□□ -0.56
POLR2J3-213ENST00000508848 B4GALT3O60512 393 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 RHOBTB3O94955 611 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 KIF20AO95235 890 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 ADSSP30520 456 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 LRPAP1P30533 357 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 ERVFC1P60507 584 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 ADAM15Q13444 863 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 CUL4BQ13620 913 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 SMC1AQ14683 1233 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 UPP1Q16831 310 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 PUS10Q3MIT2 529 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 PDXDC1Q6P996 788 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 GOLGA5Q8TBA6 731 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 STAMQ92783 540 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 HLA-CQ95604 372 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 CCDC47Q96A33 483 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 FBXL18Q96ME1 805 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 GSDMAQ96QA5 445 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 ZBP1Q9H171 429 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 RXFP1Q9HBX9 757 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 HOOK1Q9UJC3 728 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 ADAM28Q9UKQ2 775 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 AGO2Q9UKV8 859 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 GDAQ9Y2T3 454 aa11.55□□□□□ -0.56
POLR2J3-213ENST00000508848 ANKRD63C9JTQ0 380 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 TRAPPC3O43617 180 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 IL18RAPO95256 599 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 PAPLNO95428 1278 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 CXCL14O95715 111 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 SOD2P04179 222 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 HOXD13P35453 343 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 AFMP43652 599 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 CASP5P51878 434 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 DSG1Q02413 1049 aa11.54□□□□□ -0.56
POLR2J3-213ENST00000508848 CREMQ03060 361 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms