RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 ODR4Q5SWX8 454 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 EFCAB12Q6NXP0 572 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 SYT12Q8IV01 421 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 CASKIN2Q8WXE0 1202 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 MYOCQ99972 504 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 CSRNP2Q9H175 543 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 TDP1Q9NUW8 608 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 THRAP3Q9Y2W1 955 aaKnown RBP9.3□□□□□ -0.92
CHD1-205ENST00000508756 PNPLA7Q6ZV29 1317 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 GRXCR1A8MXD5 290 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 LEFTY2O00292 366 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 FAM20BO75063 409 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 SNRPA1P09661 255 aaKnown RBP9.29□□□□□ -0.92
CHD1-205ENST00000508756 ATP5JP18859 108 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 DDCP20711 480 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 APOBEC3AP31941 199 aaPredicted RBP9.29□□□□□ -0.92
CHD1-205ENST00000508756 RRP12Q5JTH9 1297 aaKnown RBP9.29□□□□□ -0.92
CHD1-205ENST00000508756 RAVER1Q8IY67 606 aaKnown RBP9.29□□□□□ -0.92
CHD1-205ENST00000508756 HSPBAP1Q96EW2 488 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 TMX3Q96JJ7 454 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 PLEKHG4BQ96PX9 1271 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 POGKQ9P215 609 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 SLC23A1Q9UHI7 598 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 SORCS3Q9UPU3 1222 aa9.29□□□□□ -0.92
CHD1-205ENST00000508756 ABLIM3O94929 683 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 AMHP03971 560 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 TNFRSF1AP19438 455 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 RAB27AP51159 221 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 PIN1Q13526 163 aaPredicted RBP9.28□□□□□ -0.92
CHD1-205ENST00000508756 DRICH1Q6PGQ1 229 aaPredicted RBP9.28□□□□□ -0.92
CHD1-205ENST00000508756 RSPH3Q86UC2 560 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 ZFP28Q8NHY6 868 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 CACTINQ8WUQ7 758 aaKnown RBP9.28□□□□□ -0.92
CHD1-205ENST00000508756 NDC1Q9BTX1 674 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 ZNF703Q9H7S9 590 aaPredicted RBP9.28□□□□□ -0.92
CHD1-205ENST00000508756 CLCA2Q9UQC9 943 aa9.28□□□□□ -0.92
CHD1-205ENST00000508756 AKAP10O43572 662 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 PF4V1P10720 104 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 SLC25A3Q00325 362 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 CDC42EP1Q00587 391 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 FOXE3Q13461 319 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 RABL3Q5HYI8 236 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 ATXN7L2Q5T6C5 722 aaPredicted RBP9.27□□□□□ -0.93
CHD1-205ENST00000508756 OTUD7BQ6GQQ9 843 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 ZNF503Q96F45 646 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 RTFDC1Q9BY42 306 aaPredicted RBP9.27□□□□□ -0.93
CHD1-205ENST00000508756 RHOBTB2Q9BYZ6 727 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 TCF7L1Q9HCS4 588 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 PARPBPQ9NWS1 579 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 EIF2B4Q9UI10 523 aaKnown RBP9.27□□□□□ -0.93
CHD1-205ENST00000508756 PCDHB1Q9Y5F3 818 aa9.27□□□□□ -0.93
CHD1-205ENST00000508756 NHLH2Q02577 135 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 ZNF529Q6P280 563 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 CATIPQ7Z7H3 387 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 DCBLD1Q8N8Z6 715 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 IFI44Q8TCB0 444 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 CPT1CQ8TCG5 803 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 ZNF747Q9BV97 191 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 VPS11Q9H270 941 aa9.26□□□□□ -0.93
CHD1-205ENST00000508756 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.26□□□□□ -0.93
CHD1-205ENST00000508756 TEX33O43247 280 aa9.25□□□□□ -0.93
CHD1-205ENST00000508756 SGTAO43765 313 aa9.25□□□□□ -0.93
CHD1-205ENST00000508756 SCAF4O95104 1147 aaKnown RBP9.25□□□□□ -0.93
CHD1-205ENST00000508756 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
CHD1-205ENST00000508756 FXR1P51114 621 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD1-205ENST00000508756 CHN2P52757 468 aa9.25□□□□□ -0.93
CHD1-205ENST00000508756 EPHB1P54762 984 aa9.25□□□□□ -0.93
CHD1-205ENST00000508756 MIIPQ5JXC2 388 aa9.25□□□□□ -0.93
CHD1-205ENST00000508756 SEM1Q6ZVN7 128 aa9.25□□□□□ -0.93
CHD1-205ENST00000508756 UBE3BQ7Z3V4 1068 aa9.25□□□□□ -0.93
CHD1-205ENST00000508756 CT47B1P0C2W7 299 aaPredicted RBP9.24□□□□□ -0.93
CHD1-205ENST00000508756 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
CHD1-205ENST00000508756 PDCP20941 246 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 MGAT1P26572 445 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 RNASE9P60153 205 aaKnown RBP9.24□□□□□ -0.93
CHD1-205ENST00000508756 DBX2Q6ZNG2 339 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 PLXDC1Q8IUK5 500 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 DRC7Q8IY82 874 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 CLPTM1LQ96KA5 538 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 MRGPRX4Q96LA9 322 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 NEU1Q99519 415 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 FBXO34Q9NWN3 711 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 ZNF180Q9UJW8 692 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 ANKRD6Q9Y2G4 727 aa9.24□□□□□ -0.93
CHD1-205ENST00000508756 CFAP20Q9Y6A4 193 aaKnown RBP9.24□□□□□ -0.93
CHD1-205ENST00000508756 DRGXA6NNA5 263 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 AHRRA9YTQ3 701 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 TRIM24O15164 1050 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 ZNF280AP59817 542 aaPredicted RBP9.23□□□□□ -0.93
CHD1-205ENST00000508756 CTXN1P60606 82 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 DSC2Q02487 901 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 PPP4R3AQ6IN85 833 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 NSUN6Q8TEA1 469 aaKnown RBP9.23□□□□□ -0.93
CHD1-205ENST00000508756 JPH3Q8WXH2 748 aaPredicted RBP9.23□□□□□ -0.93
CHD1-205ENST00000508756 DMRTA2Q96SC8 542 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 TEX101Q9BY14 249 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 ZNF341Q9BYN7 854 aa9.23□□□□□ -0.93
CHD1-205ENST00000508756 GTPBP4Q9BZE4 634 aaKnown RBP9.23□□□□□ -0.93
CHD1-205ENST00000508756 ZNF768Q9H5H4 540 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms