RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 BRCA2P51587 3418 aa11.86□□□□□ -0.51
SH3RF1-203ENST00000508685 DNAH12Q6ZR08 3092 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 FAM107AO95990 144 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 TGFB3P10600 412 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 HSD17B3P37058 310 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 DNA2P51530 1060 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 ICE2Q659A1 982 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 DAAM2Q86T65 1068 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 NT5DC3Q86UY8 548 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 DNAAF5Q86Y56 855 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 SLC30A5Q8TAD4 765 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 RFFLQ8WZ73 363 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 CEP89Q96ST8 783 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 DHX33Q9H6R0 707 aaKnown RBP11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 ARHGAP28Q9P2N2 729 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 ABT1Q9ULW3 272 aaKnown RBP11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 EXOC7Q9UPT5 735 aa11.85□□□□□ -0.51
SH3RF1-203ENST00000508685 GOLGA6L10A0A0M3HER8 536 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 ZSCAN5CA6NGD5 496 aaPredicted RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 F8VZ95 297 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 PDHXO00330 501 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 DDX3XO00571 662 aaKnown RBP eCLIP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 MARK3P27448 753 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 CTNNA1P35221 906 aaKnown RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 STAT5BP51692 787 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 RTP1P59025 263 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 RNASE9P60153 205 aaKnown RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 LMO3Q8TAP4 145 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 ASAP3Q8TDY4 903 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 U2AF1L4Q8WU68 220 aaKnown RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 SLC7A3Q8WY07 619 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 CCDC127Q96BQ5 260 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 IFT74Q96LB3 600 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 POP1Q99575 1024 aaKnown RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 GPR88Q9GZN0 384 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 CARD9Q9H257 536 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 MROH8Q9H579 483 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 APEX2Q9UBZ4 518 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 FAM187AA6NFU0 413 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 H0YGN5 161 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 FSBPO95073 299 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 ECHS1P30084 290 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 COPB2P35606 906 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 HADHBP55084 474 aaKnown RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 PLCB4Q15147 1175 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 TCEAL1Q15170 157 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 NAA35Q5VZE5 725 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 NLRP14Q86W24 1093 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 SH2D3CQ8N5H7 860 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 CTNNBL1Q8WYA6 563 aaPredicted RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 POMGNT1Q8WZA1 660 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 COPS5Q92905 334 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 BICD1Q96G01 975 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 CCT8L2Q96SF2 557 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 CNOT10Q9H9A5 744 aaKnown RBP11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 PDGFCQ9NRA1 345 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 DNAJC12Q9UKB3 198 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 PNMA3Q9UL41 463 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 NFS1Q9Y697 457 aa11.84□□□□□ -0.51
SH3RF1-203ENST00000508685 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 LRRIQ4A6NIV6 560 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 EVI5O60447 810 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 GLRA2P23416 452 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 GALCP54803 685 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 SNRPFP62306 86 aaKnown RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 DHX34Q14147 1143 aaKnown RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 DRAP1Q14919 205 aaPredicted RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 CCL15Q16663 113 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 SKIDA1Q1XH10 827 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 RHOT2Q8IXI1 618 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 MORC4Q8TE76 937 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 ZNF473Q8WTR7 871 aaKnown RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 BRI3BPQ8WY22 251 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 SEPT1Q8WYJ6 367 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 GPR20Q99678 358 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 NIFKQ9BYG3 293 aaKnown RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 TMEM117Q9H0C3 514 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 TOPORSQ9NS56 1045 aaPredicted RBP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
SH3RF1-203ENST00000508685 FAM170AA1A519 330 aa11.82□□□□□ -0.52
SH3RF1-203ENST00000508685 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
SH3RF1-203ENST00000508685 GMNCA6NCL1 334 aa11.82□□□□□ -0.52
SH3RF1-203ENST00000508685 MIF4GDA9UHW6 222 aaKnown RBP11.82□□□□□ -0.52
SH3RF1-203ENST00000508685 NOP56O00567 594 aaKnown RBP11.82□□□□□ -0.52
SH3RF1-203ENST00000508685 P4HA2O15460 535 aa11.82□□□□□ -0.52
SH3RF1-203ENST00000508685 PAEPP09466 180 aa11.82□□□□□ -0.52
SH3RF1-203ENST00000508685 TNFAIP3P21580 790 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms