RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 TCEAL9Q9UHQ7 104 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 DUSP13Q9UII6 198 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF451Q9Y4E5 1061 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 RIPK3Q9Y572 518 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 TNKSO95271 1327 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 ABCB11O95342 1321 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 ROBO3Q96MS0 1386 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF236Q9UL36 1845 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 DOCK3Q8IZD9 2030 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 CCDC171Q6TFL3 1326 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 DNAJC25-GNG10A0A024R161 153 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 CBFA2T2O43439 604 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 KLF4O43474 513 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 SIGLEC6O43699 453 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ORC4O43929 436 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 CFBP00751 764 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 GH1P01241 217 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 EPHX1P07099 455 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 HSPD1P10809 573 aaKnown RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 GNAT1P11488 350 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 SRFP11831 508 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 MYCLP12524 364 aaPredicted RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ITGA4P13612 1032 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 CD247P20963 164 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 KIF5BP33176 963 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ALDH5A1P51649 535 aaPredicted RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 RRP1P56182 461 aaKnown RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 SNAP25P60880 206 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ZP2Q05996 745 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 PLCL1Q15111 1095 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 TCEAL1Q15170 157 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 PTGISQ16647 500 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 DGKDQ16760 1214 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 PTPROQ16827 1216 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ASPRV1Q53RT3 343 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 C20orf194Q5TEA3 1177 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 NFXL1Q6ZNB6 911 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ADAT2Q7Z6V5 191 aaKnown RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 CATIPQ7Z7H3 387 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 RSPH3Q86UC2 560 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 TSPYL5Q86VY4 417 aaPredicted RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 DGKHQ86XP1 1220 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 WFDC3Q8IUB2 231 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 SIAH1Q8IUQ4 282 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 FAM126BQ8IXS8 530 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 FAM133AQ8N9E0 248 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 KLHDC9Q8NEP7 349 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 REPS2Q8NFH8 660 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ADCY4Q8NFM4 1077 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 CAGE1Q8TC20 777 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 PHOSPHO2Q8TCD6 241 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 DRC1Q96MC2 740 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 GUCD1Q96NT3 240 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 IWS1Q96ST2 819 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 RMDN3Q96TC7 470 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 SEC62Q99442 399 aaKnown RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 TMEM47Q9BQJ4 181 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 AMNQ9BXJ7 453 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 HDAC8Q9BY41 377 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 LNPKQ9C0E8 428 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 MAF1Q9H063 256 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 TRPV6Q9H1D0 765 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 UPF3AQ9H1J1 476 aaKnown RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 PRDM12Q9H4Q4 367 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 GP6Q9HCN6 339 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 PRDM7Q9NQW5 492 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 CHST7Q9NS84 486 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 ZNF215Q9UL58 517 aaPredicted RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 FAM50BQ9Y247 325 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 PCDHA11Q9Y5I1 949 aa4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 BAZ2AQ9UIF9 1905 aaKnown RBP4.33□□□□□ -1.72
HMGN1P11-201ENST00000508668 SIPA1L1O43166 1804 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 PLIN4Q96Q06 1357 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 EMSYQ7Z589 1322 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 WDR19Q8NEZ3 1342 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 IGKV6D-41A0A0C4DH26 115 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 SSU72P8A0A1W2PR75 194 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 M0QZ92 97 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 NMT2O60551 498 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 EIF3JO75822 258 aaKnown RBP4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 BAIAP3O94812 1187 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 GJB6O95452 261 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 FGAP02671 866 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 ESR1P03372 595 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 AMHP03971 560 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 GOLGA8HP0CJ92 632 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 CCND2P30279 289 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 PDE1AP54750 535 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 GP2P55259 537 aaKnown RBP4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 PSMC6P62333 389 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 RPS6P62753 249 aaKnown RBP4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 EGR3Q06889 387 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 ZNF543Q08ER8 600 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 HDAC1Q13547 482 aaPredicted RBP4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 RAB33AQ14088 237 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 PPP2R5DQ14738 602 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 NCAPHQ15003 741 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 ALX1Q15699 326 aa4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 CDC37Q16543 378 aaPredicted RBP4.32□□□□□ -1.72
HMGN1P11-201ENST00000508668 DDR2Q16832 855 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms