RNA–Protein interactions for RNA: ENST00000508625.1

PDS5A-208, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 3

Gene PDS5A, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-208ENST00000508625 PDZD4Q76G19 769 aaPredicted RBP2.34□□□□□ -2.03
PDS5A-208ENST00000508625 PEG10Q86TG7 708 aaKnown RBP2.34□□□□□ -2.03
PDS5A-208ENST00000508625 COLGALT2Q8IYK4 626 aa2.34□□□□□ -2.03
PDS5A-208ENST00000508625 CDYL2Q8N8U2 506 aa2.34□□□□□ -2.03
PDS5A-208ENST00000508625 MARK4Q96L34 752 aa2.34□□□□□ -2.03
PDS5A-208ENST00000508625 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
PDS5A-208ENST00000508625 RNPEPQ9H4A4 650 aa2.34□□□□□ -2.03
PDS5A-208ENST00000508625 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.34□□□□□ -2.03
PDS5A-208ENST00000508625 MDFICQ9P1T7 246 aa2.34□□□□□ -2.03
PDS5A-208ENST00000508625 PCDHB6Q9Y5E3 794 aa2.34□□□□□ -2.03
PDS5A-208ENST00000508625 MYPNQ86TC9 1320 aa2.34□□□□□ -2.04
PDS5A-208ENST00000508625 A0A1W2PR48 441 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 H7C1D1 291 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 YY2O15391 372 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MPPED1O15442 326 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 SEC24DO94855 1032 aaPredicted RBP2.33□□□□□ -2.04
PDS5A-208ENST00000508625 LATS1O95835 1130 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 GPANK1O95872 356 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 FGFR4P22455 802 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MPGP29372 298 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 SREBF1P36956 1147 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MMP13P45452 471 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MECP2P51608 486 aaKnown RBP2.33□□□□□ -2.04
PDS5A-208ENST00000508625 VAV2P52735 878 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 FHL3Q13643 280 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 UBE3CQ15386 1083 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 TMEM119Q4V9L6 283 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 ZNF628Q5EBL2 1059 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 SUMO4Q6EEV6 95 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 ABHD17CQ6PCB6 329 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 FOXR2Q6PJQ5 311 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MED25Q71SY5 747 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 SPATC1Q76KD6 591 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 KRT73Q86Y46 540 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MCF2L2Q86YR7 1114 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 KIAA1958Q8N8K9 716 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 GSTCDQ8NEC7 633 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 FBXO18Q8NFZ0 1043 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MDM1Q8TC05 714 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 SSH3Q8TE77 659 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 FUBP3Q96I24 572 aaKnown RBP eCLIP2.33□□□□□ -2.04
PDS5A-208ENST00000508625 EXOC2Q96KP1 924 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 SPRTNQ9H040 489 aaPredicted RBP2.33□□□□□ -2.04
PDS5A-208ENST00000508625 POFUT1Q9H488 388 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 KCNE5Q9UJ90 142 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 ADAM21Q9UKJ8 722 aa2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MTO1Q9Y2Z2 717 aaKnown RBP2.33□□□□□ -2.04
PDS5A-208ENST00000508625 MRPS23Q9Y3D9 190 aaKnown RBP2.33□□□□□ -2.04
PDS5A-208ENST00000508625 PJA2O43164 708 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 NRP2O60462 931 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 ITGA10O75578 1167 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 ELFN1P0C7U0 828 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 MCAMP43121 646 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 NRG3P56975 720 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 CLRN1P58418 232 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 HSD11B2P80365 405 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 SF3B3Q15393 1217 aaKnown RBP2.32□□□□□ -2.04
PDS5A-208ENST00000508625 FAM153CQ494X1 144 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 SLC18B1Q6NT16 456 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 LMBR1LQ6UX01 489 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 SLC35B2Q8TB61 432 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 NSMCE1Q8WV22 266 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 CASKIN2Q8WXE0 1202 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 TFAP2BQ92481 460 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 CEP95Q96GE4 821 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 SCLYQ96I15 445 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 FDXACB1Q9BRP7 624 aaPredicted RBP2.32□□□□□ -2.04
PDS5A-208ENST00000508625 TMEM79Q9BSE2 394 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 QTRT1Q9BXR0 403 aaKnown RBP2.32□□□□□ -2.04
PDS5A-208ENST00000508625 NCOA5Q9HCD5 579 aaKnown RBP2.32□□□□□ -2.04
PDS5A-208ENST00000508625 TUBA8Q9NY65 449 aaPredicted RBP2.32□□□□□ -2.04
PDS5A-208ENST00000508625 PADI4Q9UM07 663 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 USP18Q9UMW8 372 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 AATKQ6ZMQ8 1374 aa2.32□□□□□ -2.04
PDS5A-208ENST00000508625 TCRBV16S1A1N1A0A5B0 115 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 PTPDC1A2A3K4 754 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 M0R2C6 588 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 KLF4O43474 513 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 ERN1O75460 977 aaKnown RBP2.31□□□□□ -2.04
PDS5A-208ENST00000508625 LTA4HP09960 611 aaKnown RBP2.31□□□□□ -2.04
PDS5A-208ENST00000508625 PDIA4P13667 645 aaKnown RBP2.31□□□□□ -2.04
PDS5A-208ENST00000508625 FLT3LGP49771 235 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 LINC00205P59089 165 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 MGAT5Q09328 741 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 NBPF8Q3BBV2 869 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 SUPT20HL1Q3ZLR7 823 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 MFSD14BQ5SR56 506 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 PXDC1Q5TGL8 231 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 ACRBPQ8NEB7 543 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 GAB3Q8WWW8 586 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 WBP1Q96G27 269 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 FBXL20Q96IG2 436 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 HAPLN3Q96S86 360 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 VPS16Q9H269 839 aa2.31□□□□□ -2.04
PDS5A-208ENST00000508625 FNDC1Q4ZHG4 1894 aaPredicted RBP2.31□□□□□ -2.04
PDS5A-208ENST00000508625 TTC3P53804 2025 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 TRGV11A0A075B6L2 103 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 CCDC78A2IDD5 438 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 PRSS44E7EML9 344 aa2.3□□□□□ -2.04
PDS5A-208ENST00000508625 PPP6CO00743 305 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms