RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 MGAT1P26572 445 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 PCSK1P29120 753 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 GUCY1A2P33402 732 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 IARSP41252 1262 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 SLC5A3P53794 718 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 DPF2Q92785 391 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 PRRX2Q99811 253 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 MRI1Q9BV20 369 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 SENP6Q9GZR1 1112 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 ZNF277Q9NRM2 450 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 DKK2Q9UBU2 259 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 MCM8Q9UJA3 840 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 AJAP1Q9UKB5 411 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 ZBTB21Q9ULJ3 1066 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 ATP8A1Q9Y2Q0 1164 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 ACTL7AQ9Y615 435 aa6.34□□□□□ -1.39
UBE2D3-225ENST00000508476 GRID2IPA4D2P6 1211 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 UNC119BA6NIH7 251 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 PROZP22891 400 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 COL10A1Q03692 680 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 MGAT2Q10469 447 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 SP140Q13342 867 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 PTPAQ15257 358 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 INAVAQ3KP66 663 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 MED25Q71SY5 747 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 ZGPATQ8N5A5 531 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 CPEB3Q8NE35 698 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 GPR150Q8NGU9 434 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 CCHCR1Q8TD31 782 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 LANCL2Q9NS86 450 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 SLC23A1Q9UHI7 598 aa6.33□□□□□ -1.4
UBE2D3-225ENST00000508476 TMEM191CA6NGB0 347 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 TMEM200CA6NKL6 621 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 OVOL3O00110 214 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 MT-CO1P00395 513 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 AMY1AP04745 511 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 SLC6A2P23975 617 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 CDKN1CP49918 316 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 CLUL1Q15846 466 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 FAM180AQ6UWF9 173 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 PLXDC1Q8IUK5 500 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 NRG4Q8WWG1 115 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 ADAM2Q99965 735 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 CCDC8Q9H0W5 538 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 FBXO34Q9NWN3 711 aa6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 RUVBL1Q9Y265 456 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-225ENST00000508476 GAGE12BA1L429 117 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 CCDC78A2IDD5 438 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 PRSS23O95084 383 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 ELANEP08246 267 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 IL2RBP14784 551 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 ATP5JP18859 108 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 RRP12Q5JTH9 1297 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 AGAP9Q5VTM2 703 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 BEND2Q8NDZ0 799 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 OR56A1Q8NGH5 318 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 RAB24Q969Q5 203 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 ZSWIM1Q9BR11 485 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 PUS7LQ9H0K6 701 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 SERHL2Q9H4I8 314 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 TUBD1Q9UJT1 453 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 CADPSQ9ULU8 1353 aa6.31□□□□□ -1.4
UBE2D3-225ENST00000508476 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 MARCH11A6NNE9 402 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 ENDOD1O94919 500 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 ZEB1P37275 1124 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 TP53BP2Q13625 1128 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 ABCB5Q2M3G0 1257 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 ZNF529Q6P280 563 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 PGM2L1Q6PCE3 622 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 UBE3BQ7Z3V4 1068 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 ARHGEF19Q8IW93 802 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 AMOTL1Q8IY63 956 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 C1orf162Q8NEQ5 155 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 JADE3Q92613 823 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 KLHL11Q9NVR0 708 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 MOCS1Q9NZB8 636 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
UBE2D3-225ENST00000508476 PCDHGA12O60330 932 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 SPDEFO95238 335 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 GCP02774 474 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 DDX6P26196 483 aaKnown RBP eCLIP6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 INHBEP58166 350 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 EVA1CP58658 441 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 AMPD3Q01432 767 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 RESTQ13127 1097 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 MTM1Q13496 603 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 MTMR1Q13613 665 aa6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 FAM50AQ14320 339 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-225ENST00000508476 UBXN2BQ14CS0 331 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms