RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CLUHO75153 1309 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 CITO14578 2027 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 DOCK6Q96HP0 2047 aa14.32□□□□□ -0.12
HMGCS1-205ENST00000508319 AVPR2P30518 371 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 PTPN5P54829 565 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 ATP2C1P98194 919 aaPredicted RBP14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 RILPL1Q5EBL4 403 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 GLRA4Q5JXX5 417 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 MCTP1Q6DN14 999 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 CYP26C1Q6V0L0 522 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 CEP120Q8N960 986 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 PIK3R5Q8WYR1 880 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 SMG7Q92540 1137 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 PPP1R10Q96QC0 940 aaKnown RBP14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 TTPALQ9BTX7 342 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 NT5C3AQ9H0P0 336 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 ARHGAP28Q9P2N2 729 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 DNM3Q9UQ16 869 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 TNFSF13BQ9Y275 285 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 KIF3AQ9Y496 699 aa14.31□□□□□ -0.12
HMGCS1-205ENST00000508319 PDCD11Q14690 1871 aaKnown RBP14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 VPS13AQ96RL7 3174 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 CCDC169A6NNP5 214 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 K7ERI5 159 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 GJB2P29033 226 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 PEX3P56589 373 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 DMP1Q13316 513 aaPredicted RBP14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 HYIQ5T013 277 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 FAM171A1Q5VUB5 890 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 RINT1Q6NUQ1 792 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 C1orf186Q6ZWK4 172 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 DRC1Q96MC2 740 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 ACO2Q99798 780 aaKnown RBP14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 CLSTN3Q9BQT9 956 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 CDT1Q9H211 546 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 KCNK12Q9HB15 430 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 PTPRHQ9HD43 1115 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 ZDHHC7Q9NXF8 308 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 DAXXQ9UER7 740 aaPredicted RBP14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 FBXW11Q9UKB1 542 aa14.3□□□□□ -0.12
HMGCS1-205ENST00000508319 TMEM189-UBE2V1I3L0A0 370 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 ABLIM1O14639 778 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 PROZP22891 400 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 IGFBP6P24592 240 aaPredicted RBP14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 ELAVL2Q12926 359 aaKnown RBP14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 PSMD5Q16401 504 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 ZNF568Q3ZCX4 644 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 LNX1Q8TBB1 728 aaPredicted RBP14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 STAMQ92783 540 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 PRKD2Q9BZL6 878 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 TMEM134Q9H6X4 195 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 C17orf75Q9HAS0 396 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 GOLGA2P5Q9HBQ8 144 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 EPS15L1Q9UBC2 864 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 DUSP12Q9UNI6 340 aa14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 ZFHX2Q9C0A1 2572 aaPredicted RBP14.29□□□□□ -0.12
HMGCS1-205ENST00000508319 ADAM12O43184 909 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 ZMYND10O75800 440 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 GBP2P32456 591 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 GRM5P41594 1212 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 CLCNKBP51801 687 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 SOX4Q06945 474 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 TDGQ13569 410 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 UPP1Q16831 310 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 CD300LGQ6UXG3 332 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 ALKAL1Q6UXT8 129 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 APBB1IPQ7Z5R6 666 aaPredicted RBP14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 TMEM105Q8N8V8 129 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 C3orf58Q8NDZ4 430 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 PNMA5Q96PV4 448 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 MYADMQ96S97 322 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 MRPL4Q9BYD3 311 aaKnown RBP14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 KMT5AQ9NQR1 393 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 IGSF9Q9P2J2 1179 aa14.28□□□□□ -0.12
HMGCS1-205ENST00000508319 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 H3BQV1 296 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC16A4O15374 487 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 NARSO43776 548 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 B3GAT3O94766 335 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 FGFR3P22607 806 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 NUBP1P53384 320 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 ZRSR1Q15695 479 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 XKR4Q5GH76 650 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 CWF19L1Q69YN2 538 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 MPZL3Q6UWV2 235 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 SNX27Q96L92 541 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 UROC1Q96N76 676 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 TIPINQ9BVW5 301 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 TARS2Q9BW92 718 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 PIDD1Q9HB75 910 aa14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 TOPORSQ9NS56 1045 aaPredicted RBP14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-205ENST00000508319 NOTCH4Q99466 2003 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms