RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 BARX2Q9UMQ3 279 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-211ENST00000507689 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 IRAK3Q9Y616 596 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 MYH11P35749 1972 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
COL1A1-211ENST00000507689 B4GALT3O60512 393 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 TBX10O75333 385 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 GCNT3O95395 438 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 ADH1AP07327 375 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 CLTAP09496 248 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 NMT1P30419 496 aaKnown RBP17.07■□□□□ 0.32
COL1A1-211ENST00000507689 NUCB2P80303 420 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 GTF2BQ00403 316 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 PPP2R3AQ06190 1150 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 POSTNQ15063 836 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 GLRA4Q5JXX5 417 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 FUT10Q6P4F1 479 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 PDXDC1Q6P996 788 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 LRRC15Q8TF66 581 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-211ENST00000507689 AUTS2Q8WXX7 1259 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 KCNN1Q92952 543 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 ZBTB45Q96K62 511 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-211ENST00000507689 ACCSQ96QU6 501 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 MSTO1Q9BUK6 570 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 ST6GALNAC4Q9H4F1 302 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 RPF1Q9H9Y2 349 aaKnown RBP17.07■□□□□ 0.32
COL1A1-211ENST00000507689 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL1A1-211ENST00000507689 RCOR1Q9UKL0 485 aa17.07■□□□□ 0.32
COL1A1-211ENST00000507689 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 SMIM28A0A1B0GU29 152 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 TULP1O00294 542 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-211ENST00000507689 PTGESO14684 152 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 OGTO15294 1046 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 POLR2DO15514 142 aaKnown RBP17.06■□□□□ 0.32
COL1A1-211ENST00000507689 CLASP2O75122 1294 aaKnown RBP17.06■□□□□ 0.32
COL1A1-211ENST00000507689 B3GAT3O94766 335 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 LTBRP36941 435 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 ASIC1P78348 528 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 COASYQ13057 564 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 DCLRE1AQ6PJP8 1040 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 SHC4Q6S5L8 630 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 ZNF720Q7Z2F6 126 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 CEP57Q86XR8 500 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 MAP4K3Q8IVH8 894 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 CEP120Q8N960 986 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 CCDC34Q96HJ3 373 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 SNX27Q96L92 541 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 PLEKHA5Q9HAU0 1116 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 MARCH5Q9NX47 278 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 TBC1D7Q9P0N9 293 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 PRKAG3Q9UGI9 489 aa17.06■□□□□ 0.32
COL1A1-211ENST00000507689 TDRD15B5MCY1 1934 aaKnown RBP17.06■□□□□ 0.32
COL1A1-211ENST00000507689 MBTPS2O43462 519 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 PIGRP01833 764 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 DLX2Q07687 328 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-211ENST00000507689 ADALQ6DHV7 355 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 ANKRD54Q6NXT1 300 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 TMEM184AQ6ZMB5 413 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 CD302Q8IX05 232 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 HASPINQ8TF76 798 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-211ENST00000507689 POMGNT1Q8WZA1 660 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 RABGGTAQ92696 567 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 FAM212AQ96EL1 285 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 PPP1R10Q96QC0 940 aaKnown RBP17.05■□□□□ 0.32
COL1A1-211ENST00000507689 TSPAN18Q96SJ8 248 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 TMEM206Q9H813 350 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 OLFML3Q9NRN5 406 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 KCNH3Q9ULD8 1083 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 NUB1Q9Y5A7 615 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 HCFC2Q9Y5Z7 792 aa17.05■□□□□ 0.32
COL1A1-211ENST00000507689 A0A087X0B3 334 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 IL9P15248 144 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 KCNE1P15382 129 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 RPL9P32969 192 aaKnown RBP17.04■□□□□ 0.32
COL1A1-211ENST00000507689 DSG1Q02413 1049 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 ITIH3Q06033 890 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 SMAD2Q15796 467 aaKnown RBP17.04■□□□□ 0.32
COL1A1-211ENST00000507689 ZC2HC1CQ53FD0 456 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-211ENST00000507689 AXDND1Q5T1B0 1012 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-211ENST00000507689 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 RESP18Q5W5W9 173 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 GPR65Q8IYL9 337 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 SMRP1Q8NCR6 262 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-211ENST00000507689 STAMQ92783 540 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 DNAJC19Q96DA6 116 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 MSLNLQ96KJ4 702 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 KLHL5Q96PQ7 755 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 TTPALQ9BTX7 342 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 CLEC1BQ9P126 229 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 CNTN3Q9P232 1028 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
COL1A1-211ENST00000507689 KIF4AO95239 1232 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 GLP2RO95838 553 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 GLUD1P00367 558 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 CNPP09543 421 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms