RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TMEM169Q96HH4 297 aa19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 ZMAT2Q96NC0 199 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 ACAP3Q96P50 834 aa19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 ACCSQ96QU6 501 aa19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 PAAF1Q9BRP4 392 aa19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 TSHZ2Q9NRE2 1034 aa19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 PCDHB13Q9Y5F0 798 aa19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 STYXL1Q9Y6J8 313 aa19.93■□□□□ 0.78
PDLIM7-216ENST00000506537 CARNS1A5YM72 827 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 ZNF202O95125 648 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 THP07101 528 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 CXCL8P10145 99 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 ADSSP30520 456 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 HOXD13P35453 343 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 YARSP54577 528 aaKnown RBP19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 KRT17Q04695 432 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 TUSC3Q13454 348 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 SLC10A6Q3KNW5 377 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 FMR1NBQ8N0W7 255 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 RABGGTAQ92696 567 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 MSTO1Q9BUK6 570 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 TOPORSQ9NS56 1045 aaPredicted RBP19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 CNTN3Q9P232 1028 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 FAN1Q9Y2M0 1017 aa19.92■□□□□ 0.78
PDLIM7-216ENST00000506537 SMIM28A0A1B0GU29 152 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 PVALEFA0A1B0GWK0 134 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 CASTOR2A6NHX0 329 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 OGTO15294 1046 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 EFEMP2O95967 443 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 ALDH2P05091 517 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 HYAL1Q12794 435 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 SNW1Q13573 536 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 PLPP4Q5VZY2 271 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 DDX53Q86TM3 631 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 ENGASEQ8NFI3 743 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 TCF25Q9BQ70 676 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 BRWD1Q9NSI6 2320 aa19.91■□□□□ 0.78
PDLIM7-216ENST00000506537 GADD45BO75293 160 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 CLTAP09496 248 aa19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 KCNE1P15382 129 aa19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 GTF2F1P35269 517 aaKnown RBP eCLIP19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 SOX4Q06945 474 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 COL19A1Q14993 1142 aa19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 SKIV2LQ15477 1246 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 ENOX2Q16206 610 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 ZBP1Q9H171 429 aa19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 GOLGA2P5Q9HBQ8 144 aa19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 ENTPD7Q9NQZ7 604 aa19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 PUF60Q9UHX1 559 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 CPSF3Q9UKF6 684 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 EXOC7Q9UPT5 735 aa19.9■□□□□ 0.78
PDLIM7-216ENST00000506537 TTC26A0AVF1 554 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 GOLGA6L4A6NEF3 574 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 HIDE1A8MVS5 230 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 EIF3DO15371 548 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 ANK1P16157 1881 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 IGFBP6P24592 240 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 DPYDQ12882 1025 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 HSP90AA2PQ14568 343 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 KMT5BQ4FZB7 885 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 RNF168Q8IYW5 571 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 VPS52Q8N1B4 723 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 TMEM130Q8N3G9 435 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 TMEM87AQ8NBN3 555 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 ZSWIM2Q8NEG5 633 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 SCFD1Q8WVM8 642 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 SLC39A2Q9NP94 309 aa19.89■□□□□ 0.77
PDLIM7-216ENST00000506537 KIF4AO95239 1232 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 MYL1P05976 194 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 ADRB2P07550 413 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 ACOT2P49753 483 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 FAM160A1Q05DH4 1040 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 SPAG1Q07617 926 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 KYAT1Q16773 422 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 SLFN12LQ6IEE8 588 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 PDE12Q6L8Q7 609 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 CRELD2Q6UXH1 353 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 STXBP4Q6ZWJ1 553 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 TAS1R1Q7RTX1 841 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 TMC7Q7Z402 723 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 SYCP3Q8IZU3 236 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 KIAA0895Q8NCT3 520 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 ZNF507Q8TCN5 953 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 MICAL1Q8TDZ2 1067 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 AUTS2Q8WXX7 1259 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 POMGNT1Q8WZA1 660 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 C18orf25Q96B23 403 aaPredicted RBP19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 CBWD1Q9BRT8 395 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 TMEM206Q9H813 350 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 NGRNQ9NPE2 291 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 EXOC1Q9NV70 894 aa19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 AGO2Q9UKV8 859 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-216ENST00000506537 UBE4BO95155 1302 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 LACTBL1A8MY62 500 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 NR1I2O75469 434 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 RPN1P04843 607 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 CTSAP10619 480 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 NRIP1P48552 1158 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 STK4Q13043 487 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms