RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 KIAA0753Q2KHM9 967 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 ANO6Q4KMQ2 910 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 SYCP2LQ5T4T6 812 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 ZNF572Q7Z3I7 529 aaPredicted RBP7.47□□□□□ -1.21
HERC4-213ENST00000506515 HEATR3Q7Z4Q2 680 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 GPR135Q8IZ08 494 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 PJA1Q8NG27 643 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 FEZF2Q8TBJ5 459 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 CEP95Q96GE4 821 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 PTPN18Q99952 460 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 TCF25Q9BQ70 676 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 LMBRD1Q9NUN5 540 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 CALCOCO1Q9P1Z2 691 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 ABCF2Q9UG63 623 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 FANCD2Q9BXW9 1451 aa7.47□□□□□ -1.21
HERC4-213ENST00000506515 DBX1A6NMT0 343 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 APAF1O14727 1248 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 STC2O76061 302 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 MALP21145 153 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 SMARCA1P28370 1054 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 IL12RB1P42701 662 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 ALDH1A3P47895 512 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 TLE1Q04724 770 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 SP140Q13342 867 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 SNAPC2Q13487 334 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 SAFBQ15424 915 aaKnown RBP eCLIP7.46□□□□□ -1.22
HERC4-213ENST00000506515 MFSD14BQ5SR56 506 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 LCE3BQ5TA77 95 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 AFMIDQ63HM1 303 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 COL23A1Q86Y22 540 aaPredicted RBP7.46□□□□□ -1.22
HERC4-213ENST00000506515 C1QL4Q86Z23 238 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 KIAA0319LQ8IZA0 1049 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 PLBD2Q8NHP8 589 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 CASKIN2Q8WXE0 1202 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 TMEM176AQ96HP8 235 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 ENKD1Q9H0I2 346 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 CHST12Q9NRB3 414 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 MOCS1Q9NZB8 636 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 STAP2Q9UGK3 403 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 DUSP10Q9Y6W6 482 aa7.46□□□□□ -1.22
HERC4-213ENST00000506515 CAPN8A6NHC0 703 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 PEX14O75381 377 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 ALOX15P16050 662 aaPredicted RBP7.45□□□□□ -1.22
HERC4-213ENST00000506515 AGFG1P52594 562 aaKnown RBP7.45□□□□□ -1.22
HERC4-213ENST00000506515 CTXN1P60606 82 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 RAB1AP62820 205 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 SURF1Q15526 300 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 FAM214AQ32MH5 1076 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 FAM47AQ5JRC9 791 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 IL31Q6EBC2 164 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 TAX1BP1Q86VP1 789 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 SLC35A4Q96G79 324 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 NT5C1BQ96P26 610 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 SEC61A2Q9H9S3 476 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 DDX21Q9NR30 783 aaKnown RBP eCLIP7.45□□□□□ -1.22
HERC4-213ENST00000506515 PNPOQ9NVS9 261 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 L1RE1Q9UN81 338 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 PCDHGB6Q9Y5F9 930 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 ABCC8Q09428 1581 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 ATRNL1Q5VV63 1379 aa7.45□□□□□ -1.22
HERC4-213ENST00000506515 A0A088AWK7 358 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 PMS2P1A4D2B8 440 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 LAMTOR5O43504 91 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 ARIH2O95376 493 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 ZSCAN22P10073 491 aaPredicted RBP7.44□□□□□ -1.22
HERC4-213ENST00000506515 CNR2P34972 360 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 FLT3LGP49771 235 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 NKX6-1P78426 367 aaPredicted RBP7.44□□□□□ -1.22
HERC4-213ENST00000506515 MRPL49Q13405 166 aaKnown RBP7.44□□□□□ -1.22
HERC4-213ENST00000506515 UBE4AQ14139 1066 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 PLS1Q14651 629 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 CNN3Q15417 329 aaKnown RBP7.44□□□□□ -1.22
HERC4-213ENST00000506515 DARS2Q6PI48 645 aaKnown RBP7.44□□□□□ -1.22
HERC4-213ENST00000506515 FAM43AQ8N2R8 423 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 DCBLD1Q8N8Z6 715 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 GNRHR2Q96P88 292 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 MYOCQ99972 504 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 BHMT2Q9H2M3 363 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 USP25Q9UHP3 1055 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 ZNF536O15090 1300 aa7.44□□□□□ -1.22
HERC4-213ENST00000506515 CFTRP13569 1480 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 CFAP69A5D8W1 941 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 TEX33O43247 280 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 HOXA3O43365 443 aaPredicted RBP7.43□□□□□ -1.22
HERC4-213ENST00000506515 HRGP04196 525 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 TYRP14679 529 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 NEK3P51956 506 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 EPHB4P54760 987 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 FAM193AP78312 1265 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 CREMQ03060 361 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 PTH1RQ03431 593 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 HDAC1Q13547 482 aaPredicted RBP7.43□□□□□ -1.22
HERC4-213ENST00000506515 FLYWCH1Q4VC44 716 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 RNF220Q5VTB9 566 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 SWSAP1Q6NVH7 229 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 FAM111BQ6SJ93 734 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 MAEAQ7L5Y9 396 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 XYLT1Q86Y38 959 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 GIMAP8Q8ND71 665 aaPredicted RBP7.43□□□□□ -1.22
HERC4-213ENST00000506515 SLC35B2Q8TB61 432 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms