RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SLC27A1Q6PCB7 646 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 PARM1Q6UWI2 310 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 GRASPQ7Z6J2 395 aaPredicted RBP6.49□□□□□ -1.37
GYPB-205ENST00000505583 EXOC8Q8IYI6 725 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 SLFN12Q8IYM2 578 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 FGF14Q92915 247 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 CCDC51Q96ER9 411 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 CLSTN3Q9BQT9 956 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 COLEC11Q9BWP8 271 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 NFKBIZQ9BYH8 718 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 PRKD2Q9BZL6 878 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 FOXQ1Q9C009 403 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 TRIM6Q9C030 488 aaPredicted RBP6.49□□□□□ -1.37
GYPB-205ENST00000505583 TBC1D17Q9HA65 648 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 ANKEF1Q9NU02 776 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 DLGAP2Q9P1A6 1054 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 STK39Q9UEW8 545 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 PARP2Q9UGN5 583 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 ADAM28Q9UKQ2 775 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 GIT1Q9Y2X7 761 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 NUMBLQ9Y6R0 609 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
GYPB-205ENST00000505583 LRRIQ4A6NIV6 560 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 NEMFO60524 1076 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 TADA2AO75478 443 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 CDKL5O76039 1030 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 RECQL4O94761 1208 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 BAG4O95429 457 aaKnown RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 ATP2B1P20020 1258 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 GPC5P78333 572 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 HSP90AA2PQ14568 343 aaPredicted RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 PCBP1Q15365 356 aaKnown RBP eCLIP6.48□□□□□ -1.372e-29■■■■■ 27.7
GYPB-205ENST00000505583 CALCRLQ16602 461 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 FAM171A1Q5VUB5 890 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 EEF1DP3Q658K8 133 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 CDCA2Q69YH5 1023 aaPredicted RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 CD300LGQ6UXG3 332 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 CYP26C1Q6V0L0 522 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 CATSPER3Q86XQ3 398 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 NOSTRINQ8IVI9 506 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 DIS3L2Q8IYB7 885 aaKnown RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 MAML2Q8IZL2 1156 aaPredicted RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 NSUN7Q8NE18 718 aaKnown RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 ITFG1Q8TB96 612 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 LNX1Q8TBB1 728 aaPredicted RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 HDAC7Q8WUI4 952 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 STAMQ92783 540 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 RTP3Q9BQQ7 232 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 KIFC3Q9BVG8 833 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 FZD8Q9H461 694 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 PLEKHA4Q9H4M7 779 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 PDZD7Q9H5P4 517 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 ARHGEF3Q9NR81 526 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 HCFC1R1Q9NWW0 138 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 ZDHHC7Q9NXF8 308 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 FNIP2Q9P278 1114 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 FBXW11Q9UKB1 542 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 SSX2IPQ9Y2D8 614 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 MTF2Q9Y483 593 aaPredicted RBP6.48□□□□□ -1.37
GYPB-205ENST00000505583 PCDHGA4Q9Y5G9 962 aa6.48□□□□□ -1.37
GYPB-205ENST00000505583 FAM186AA6NE01 2351 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 RIF1Q5UIP0 2472 aaKnown RBP6.47□□□□□ -1.37
GYPB-205ENST00000505583 I3L4J1 428 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 NRG2O14511 850 aaPredicted RBP6.47□□□□□ -1.37
GYPB-205ENST00000505583 CCL16O15467 120 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 NR1I2O75469 434 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 C8AP07357 584 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 SP9P0CG40 484 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 XBP1P17861 261 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 LIG1P18858 919 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 CD72P21854 359 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 FSHRP23945 695 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 MCM7P33993 719 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 ID4P47928 161 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 GUCY1B3Q02153 619 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 NCBP1Q09161 790 aaKnown RBP6.47□□□□□ -1.37
GYPB-205ENST00000505583 TUSC3Q13454 348 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
GYPB-205ENST00000505583 PSMD5Q16401 504 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 ECM1Q16610 540 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 GLRA4Q5JXX5 417 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 DCLRE1AQ6PJP8 1040 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 CEP57Q86XR8 500 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 GPR65Q8IYL9 337 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 DCLK2Q8N568 766 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 C3orf58Q8NDZ4 430 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 PIK3R5Q8WYR1 880 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 FGF13Q92913 245 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 GTF3C6Q969F1 213 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 RMDN1Q96DB5 314 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 NAP1L4Q99733 375 aaKnown RBP6.47□□□□□ -1.37
GYPB-205ENST00000505583 TTPALQ9BTX7 342 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 CCDC113Q9H0I3 377 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 SLC2A4RGQ9NR83 387 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.47□□□□□ -1.373e-6■■□□□ 13.8
GYPB-205ENST00000505583 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.47□□□□□ -1.37
GYPB-205ENST00000505583 GDAQ9Y2T3 454 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms