RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 SYN1P17600 705 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 ACOT2P49753 483 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 AP3M2P53677 418 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 WDR5P61964 334 aaKnown RBP11.15□□□□□ -0.62
RFC1-210ENST00000505077 NCAPHQ15003 741 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 PSMD6Q15008 389 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 ENOX2Q16206 610 aaKnown RBP11.15□□□□□ -0.62
RFC1-210ENST00000505077 CEP135Q66GS9 1140 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 GLB1LQ6UWU2 654 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 CRELD2Q6UXH1 353 aaPredicted RBP11.15□□□□□ -0.62
RFC1-210ENST00000505077 RTN4RL1Q86UN2 441 aaPredicted RBP11.15□□□□□ -0.62
RFC1-210ENST00000505077 CDR2LQ86X02 465 aaPredicted RBP11.15□□□□□ -0.62
RFC1-210ENST00000505077 THNSL1Q8IYQ7 743 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 HERVK_113Q902F9 699 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 SAAL1Q96ER3 474 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 SNX27Q96L92 541 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 CNOT6LQ96LI5 555 aaKnown RBP11.15□□□□□ -0.62
RFC1-210ENST00000505077 MFSD14AQ96MC6 490 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 SLC9A7Q96T83 725 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 SRRTQ9BXP5 876 aaKnown RBP11.15□□□□□ -0.62
RFC1-210ENST00000505077 RSAD1Q9HA92 442 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 CBX8Q9HC52 389 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 CNTN3Q9P232 1028 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 DERAQ9Y315 318 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 C2CD2Q9Y426 696 aa11.15□□□□□ -0.62
RFC1-210ENST00000505077 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.14□□□□□ -0.63
RFC1-210ENST00000505077 TTC26A0AVF1 554 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CARNS1A5YM72 827 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 XPOTO43592 962 aaKnown RBP11.14□□□□□ -0.63
RFC1-210ENST00000505077 TPM2P07951 284 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CXCL8P10145 99 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 KCNE1P15382 129 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 ATF7P17544 494 aaPredicted RBP11.14□□□□□ -0.63
RFC1-210ENST00000505077 MAGEA10P43363 369 aaPredicted RBP11.14□□□□□ -0.63
RFC1-210ENST00000505077 CASP4P49662 377 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CLDN10P78369 228 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 BFSP1Q12934 665 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CCDC40Q4G0X9 1142 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 XKR4Q5GH76 650 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 TMEM240Q5SV17 173 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 ZNF365Q70YC5 407 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 C16orf59Q7L2K0 433 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CBWD2Q8IUF1 395 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 WDR49Q8IV35 697 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 CEP120Q8N960 986 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 PHOSPHO2Q8TCD6 241 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 BORCS6Q96GS4 357 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 RPS6KC1Q96S38 1066 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 MRPL9Q9BYD2 267 aaKnown RBP11.14□□□□□ -0.63
RFC1-210ENST00000505077 SLC38A7Q9NVC3 462 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 KANSL3Q9P2N6 904 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 LRFN2Q9ULH4 789 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 PCDHB7Q9Y5E2 793 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 MYO9BQ13459 2157 aa11.14□□□□□ -0.63
RFC1-210ENST00000505077 TRIOBPQ9H2D6 2365 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 GOLGA8IPA6NC78 632 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 GOLGA8JA6NMD2 632 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 KCNJ18B7U540 433 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 N4BP1O75113 896 aaKnown RBP11.13□□□□□ -0.63
RFC1-210ENST00000505077 ZMYND10O75800 440 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 ACRP10323 421 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 GTF2H1P32780 548 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 TNFSF9P41273 254 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 VAMP7P51809 220 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 OSTNP61366 133 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 GRIK3Q13003 919 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
RFC1-210ENST00000505077 KCNJ12Q14500 433 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 SLC10A6Q3KNW5 377 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 ZBTB41Q5SVQ8 909 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 RASIP1Q5U651 963 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 ALKAL1Q6UXT8 129 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 AGMOQ6ZNB7 445 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 OTOP2Q7RTS6 562 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 LUZP1Q86V48 1076 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 IRF2BP1Q8IU81 584 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 TRIM59Q8IWR1 403 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 ABI1Q8IZP0 508 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 URGCPQ8TCY9 931 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 TOP1MTQ969P6 601 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 FNBP1Q96RU3 617 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.13□□□□□ -0.632e-9■■□□□ 11.4
RFC1-210ENST00000505077 TMEM117Q9H0C3 514 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 HES2Q9Y543 173 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
RFC1-210ENST00000505077 ARL5CA6NH57 179 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 CYP3A5P20815 502 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 BMP8BP34820 402 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 MLH1P40692 756 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 TMEM132DQ14C87 1099 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 MAN2A1Q16706 1144 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 TMEM192Q8IY95 271 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 LRRC43Q8N309 656 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms