RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MARCH5Q9NX47 278 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 LIMA1Q9UHB6 759 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 PIN4Q9Y237 131 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 GTPBP10A4D1E9 387 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 CSDE1O75534 798 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 ERVK-21P61565 698 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 SMYD4Q8IYR2 804 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 PARD3BQ8TEW8 1205 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 CCDC43Q96MW1 224 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 SAMD11Q96NU1 681 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 CGRRF1Q99675 332 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 VN1R3Q9BXE9 311 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 AGO2Q9UKV8 859 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 ZNF638Q14966 1978 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 BICDL2A1A5D9 508 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 CCDC169A6NNP5 214 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 ARHGEF15O94989 841 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 PLCB3Q01970 1234 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 PAK1Q13153 545 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 MRPL58Q14197 206 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 UPP1Q16831 310 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 INO80B-WBP1J3KQ70 363 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 M0QZQ0 153 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 ERLIN2O94905 339 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 PBX1P40424 430 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 AP3M2P53677 418 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 KCNC3Q14003 757 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 XXYLT1Q8NBI6 393 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 NELFBQ8WX92 580 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 SYAP1Q96A49 352 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 STK39Q9UEW8 545 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 SIX4Q9UIU6 781 aa9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 YBX2Q9Y2T7 364 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-208ENST00000505065 P4HA2O15460 535 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 RECQL4O94761 1208 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 CYP11A1P05108 521 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 SSBP05455 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 FKBP3Q00688 224 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 CEP120Q8N960 986 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 RAD9AQ99638 391 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 PKMYT1Q99640 499 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 XYLT2Q9H1B5 865 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZMYND8Q9ULU4 1186 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 PLAGL2Q9UPG8 496 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 CNTN6Q9UQ52 1028 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 COL4A3Q01955 1670 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 MYO16Q9Y6X6 1858 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 LRRIQ3A6PVS8 624 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 CLDN3O15551 220 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 GNA14O95837 355 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 SYN1P17600 705 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 AFF1P51825 1210 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 SURF1Q15526 300 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 SNRNP35Q16560 246 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 CAMK4Q16566 473 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZNF568Q3ZCX4 644 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 EPC2Q52LR7 807 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 RASSF8Q8NHQ8 419 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 SLC35C1Q96A29 364 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 ANO10Q9NW15 660 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 GDAP2Q9NXN4 497 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 KANSL3Q9P2N6 904 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 SMIM28A0A1B0GU29 152 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 RBAK-RBAKDNI3L0D1 243 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 VNN1O95497 513 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 KRT18P05783 430 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 ACRP10323 421 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 RPL9P32969 192 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZRSR1Q15695 479 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 MRPL9Q9BYD2 267 aaKnown RBP9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 RSAD1Q9HA92 442 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 DAAM1Q9Y4D1 1078 aa9.02□□□□□ -0.97
CDC42SE2-208ENST00000505065 TRIM49BA6NDI0 452 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 DDHD2O94830 711 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 CASP4P49662 377 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 LIG4P49917 911 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 DHX8Q14562 1220 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 CCDC47Q96A33 483 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 TBC1D13Q9NVG8 400 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 SNTG2Q9NY99 539 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 IRAK3Q9Y616 596 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 LACTBL1A8MY62 500 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 HNRNPDLO14979 420 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 LPXNO60711 386 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 CAPN15O75808 1086 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 IDEP14735 1019 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZACNQ401N2 412 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 LRRC43Q8N309 656 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 BCL7CQ8WUZ0 217 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 DACH1Q9UI36 760 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 CBWD2Q8IUF1 395 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 SLC39A11Q8N1S5 342 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 DPF3Q92784 378 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 MSTO1Q9BUK6 570 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 HERC2P3Q9BVR0 1158 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 PRDM5Q9NQX1 630 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 CHST7Q9NS84 486 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 PRKAG2Q9UGJ0 569 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 FBXL5Q9UKA1 691 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms