RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 KANSL3Q9P2N6 904 aa14.51□□□□□ -0.09
DDX41-204ENST00000504807 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
DDX41-204ENST00000504807 GIT1Q9Y2X7 761 aa14.51□□□□□ -0.09
DDX41-204ENST00000504807 C2orf16Q68DN1 1984 aa14.51□□□□□ -0.09
DDX41-204ENST00000504807 SETXQ7Z333 2677 aaKnown RBP14.5□□□□□ -0.09
DDX41-204ENST00000504807 KRBA1A5PL33 1030 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 CASTOR2A6NHX0 329 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 PRR5-ARHGAP8B1AHC4 643 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 RPL17P18621 184 aaKnown RBP14.5□□□□□ -0.09
DDX41-204ENST00000504807 NAMPTP43490 491 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 ARHGAP8P85298 464 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 LMNB2Q03252 620 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 DMWDQ09019 674 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 GNL2Q13823 731 aaKnown RBP14.5□□□□□ -0.09
DDX41-204ENST00000504807 KIAA1841Q6NSI8 718 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 CD300LGQ6UXG3 332 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 C1orf210Q8IVY1 113 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 CEP120Q8N960 986 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 ERMNQ8TAM6 284 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 TBC1D32Q96NH3 1257 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 FAM193BQ96PV7 902 aaPredicted RBP14.5□□□□□ -0.09
DDX41-204ENST00000504807 RPS6KC1Q96S38 1066 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 TBC1D17Q9HA65 648 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 KCNK12Q9HB15 430 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 UBN1Q9NPG3 1134 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 CHST7Q9NS84 486 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 PRMT7Q9NVM4 692 aaPredicted RBP14.5□□□□□ -0.09
DDX41-204ENST00000504807 CA14Q9ULX7 337 aa14.5□□□□□ -0.09
DDX41-204ENST00000504807 NOL7Q9UMY1 257 aaKnown RBP14.5□□□□□ -0.09
DDX41-204ENST00000504807 ACKR2O00590 384 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 ABLIM1O14639 778 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 N4BP1O75113 896 aaKnown RBP14.49□□□□□ -0.09
DDX41-204ENST00000504807 RECQL4O94761 1208 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 KIF4AO95239 1232 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 SPATA31D3P0C874 917 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 KLRC2P26717 231 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 ATP2C1P98194 919 aaPredicted RBP14.49□□□□□ -0.09
DDX41-204ENST00000504807 DSG1Q02413 1049 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 GRIN1Q05586 938 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 PRPF4BQ13523 1007 aaKnown RBP14.49□□□□□ -0.09
DDX41-204ENST00000504807 PDIA5Q14554 519 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 PPM1JQ5JR12 505 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 RTP2Q5QGT7 225 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 PRSS55Q6UWB4 352 aaPredicted RBP14.49□□□□□ -0.09
DDX41-204ENST00000504807 SPATA31D4Q6ZUB0 917 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 GPR161Q8N6U8 529 aaKnown RBP14.49□□□□□ -0.09
DDX41-204ENST00000504807 ACSF2Q96CM8 615 aaPredicted RBP14.49□□□□□ -0.09
DDX41-204ENST00000504807 PRIMPOLQ96LW4 560 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 PLIN2Q99541 437 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 TRIM6Q9C030 488 aaPredicted RBP14.49□□□□□ -0.09
DDX41-204ENST00000504807 RXFP1Q9HBX9 757 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 USP18Q9UMW8 372 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 CEP295Q9C0D2 2601 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 ASPMQ8IZT6 3477 aa14.49□□□□□ -0.09
DDX41-204ENST00000504807 SFI1A8K8P3 1242 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 ADAM12O43184 909 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 HIP1RO75146 1068 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 RFPL2O75678 378 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 MUTP22033 750 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 NPTX2P47972 431 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 GLUD2P49448 558 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 GRIK3Q13003 919 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 GLRA4Q5JXX5 417 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 HAUS3Q68CZ6 603 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 MCTP1Q6DN14 999 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 RINT1Q6NUQ1 792 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 FUT10Q6P4F1 479 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 C1orf186Q6ZWK4 172 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 GPR149Q86SP6 731 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 GLYCTKQ8IVS8 523 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 ZBTB8OSQ8IWT0 167 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 DEPTORQ8TB45 409 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 ZNF707Q96C28 371 aaPredicted RBP14.48□□□□□ -0.09
DDX41-204ENST00000504807 MAN1C1Q9NR34 630 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 MRPL17Q9NRX2 175 aaKnown RBP14.48□□□□□ -0.09
DDX41-204ENST00000504807 DZANK1Q9NVP4 752 aa14.48□□□□□ -0.09
DDX41-204ENST00000504807 NPHP3-ACAD11A0A0J9YXS1 232 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 N4BP3O15049 544 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 URODP06132 367 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 KCNA4P22459 653 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 PRPHP41219 470 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 PEX3P56589 373 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 SOX4Q06945 474 aaPredicted RBP14.47□□□□□ -0.09
DDX41-204ENST00000504807 NCBP1Q09161 790 aaKnown RBP14.47□□□□□ -0.09
DDX41-204ENST00000504807 RAD51AP2Q09MP3 1159 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 GIT2Q14161 759 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 MAPK6Q16659 721 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 OTOP3Q7RTS5 596 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 CABP7Q86V35 215 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 C3orf58Q8NDZ4 430 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 EMILIN2Q9BXX0 1053 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 C2orf40Q9H1Z8 148 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 CDT1Q9H211 546 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 SFXN1Q9H9B4 322 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 GOLGA2P5Q9HBQ8 144 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 PTPRHQ9HD43 1115 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 ARHGAP28Q9P2N2 729 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 WNT16Q9UBV4 365 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 ADAM28Q9UKQ2 775 aa14.47□□□□□ -0.09
DDX41-204ENST00000504807 GDAQ9Y2T3 454 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms