RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 TGFB1I1O43294 461 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CHMP2AO43633 222 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 TRIM49P0CI25 452 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 TRIM49CP0CI26 452 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 IFT88Q13099 833 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 GPATCH4Q5T3I0 446 aaKnown RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 FOXR2Q6PJQ5 311 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 FRMD5Q7Z6J6 570 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 NLRP14Q86W24 1093 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PALB2Q86YC2 1186 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CD302Q8IX05 232 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MYCBPAPQ8TBZ2 947 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MDM1Q8TC05 714 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 WHAMMQ8TF30 809 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 TBC1D22AQ8WUA7 517 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 GSX2Q9BZM3 304 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PLCB1Q9NQ66 1216 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 HCN2Q9UL51 889 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 TRAF3IP3Q9Y228 551 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MYH4Q9Y623 1939 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ARFGEF1Q9Y6D6 1849 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CYP3A7-CYP3A51PA0A087WV96 503 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 SOBPA7XYQ1 873 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 BUB1BO60566 1050 aaPredicted RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 H2AFZP0C0S5 128 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 RARAP10276 462 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ACPPP15309 386 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CYP3A7P24462 503 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CTNNA1P35221 906 aaKnown RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PDE6BP35913 854 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 FNTAP49354 379 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 JAM2P57087 298 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 IKQ13123 557 aaPredicted RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PRPF4BQ13523 1007 aaKnown RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PLS1Q14651 629 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CBWD6Q4V339 395 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CBWD3Q5JTY5 395 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CBWD5Q5RIA9 395 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 DCAF12L1Q5VU92 463 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 H2AFVQ71UI9 128 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 RAB44Q7Z6P3 723 aaPredicted RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 NT5DC3Q86UY8 548 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MCF2L2Q86YR7 1114 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 SPICE1Q8N0Z3 855 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ACTRT1Q8TDG2 376 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CRYGNQ8WXF5 182 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 GLG1Q92896 1179 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ARHGEF26Q96DR7 871 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 EIF2AK1Q9BQI3 630 aaKnown RBP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ERVK-5Q9HDB9 667 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 NENFQ9UMX5 172 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 LRRC37AA6NMS7 1700 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 SMCHD1A6NHR9 2005 aa7.11□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PHF20L1A8MW92 1017 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PGRMC1O00264 195 aaKnown RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 KHNYNO15037 678 aaKnown RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MEFVO15553 781 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 BBOX1O75936 387 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 FGGP02679 453 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 EDN3P14138 238 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 RPA1P27694 616 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CCINQ13939 588 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CCDC85BQ15834 202 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ARHGAP44Q17R89 818 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 KIAA0319Q5VV43 1072 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ARHGAP27Q6ZUM4 889 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 KIAA0825Q8IV33 1275 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 TPH2Q8IWU9 490 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 OTUD6BQ8N6M0 293 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 OR13H1Q8NG92 308 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 SLC35G2Q8TBE7 412 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 BORCS6Q96GS4 357 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PBKQ96KB5 322 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MBOAT7Q96N66 472 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ADAMTSL1Q8N6G6 1762 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 BTNL10A8MVZ5 291 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 TISP43B9A030 160 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 F5H6K3 240 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 GCOM1H8Y6P7 765 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PDXKO00764 312 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ATXN7O15265 892 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CALUO43852 315 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 TRPA1O75762 1119 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 AVPP01185 164 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 SHBGP04278 402 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MYZAPP0CAP1 466 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 NPR1P16066 1061 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 PRKCIP41743 596 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 GJA8P48165 433 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CYP2J2P51589 502 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 MAGOHP61326 146 aaKnown RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 KLRC3Q07444 240 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 RRP1BQ14684 758 aaKnown RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 DRAP1Q14919 205 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 LLGL1Q15334 1064 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 CERKLQ49MI3 558 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 ODF2Q5BJF6 829 aa7.1□□□□□ -1.27
NPHP3-AS1-202ENST00000504440 RINT1Q6NUQ1 792 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms