RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 SCLYQ96I15 445 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 DHX36Q9H2U1 1008 aaKnown RBP8.79□□□□□ -1
UBE2B-204ENST00000504431 CDIP1Q9H305 208 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 EPB41L4BQ9H329 900 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 DIAPH3Q9NSV4 1193 aa8.79□□□□□ -1
UBE2B-204ENST00000504431 DDX60LQ5H9U9 1706 aaKnown RBP8.79□□□□□ -1
UBE2B-204ENST00000504431 ZNF503-AS2A6NEH8 195 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 TRIM75PA6NK02 468 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 MPHOSPH10O00566 681 aaKnown RBP8.78□□□□□ -1
UBE2B-204ENST00000504431 FOXN1O15353 648 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 DNAJC8O75937 253 aaPredicted RBP8.78□□□□□ -1
UBE2B-204ENST00000504431 MAP2K2P36507 400 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 HAND2P61296 217 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 EMC4Q5J8M3 183 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 C12orf60Q5U649 245 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 ZC3H14Q6PJT7 736 aaKnown RBP8.78□□□□□ -1
UBE2B-204ENST00000504431 RPTNQ6XPR3 784 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 C16orf59Q7L2K0 433 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 SCYL3Q8IZE3 742 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 AHI1Q8N157 1196 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 PCDH19Q8TAB3 1148 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 PHOSPHO1Q8TCT1 267 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 PTPN18Q99952 460 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 R3HDMLQ9H3Y0 253 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 HELLSQ9NRZ9 838 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 ATP8A2Q9NTI2 1148 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 PPARGC1AQ9UBK2 798 aaKnown RBP8.78□□□□□ -1
UBE2B-204ENST00000504431 FBLN5Q9UBX5 448 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 SERPINB13Q9UIV8 391 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 DOCK1Q14185 1865 aa8.78□□□□□ -1
UBE2B-204ENST00000504431 PHIPQ8WWQ0 1821 aa8.77□□□□□ -1
UBE2B-204ENST00000504431 CCL15-CCL14A0A0B4J2E2 113 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 HGSO14964 777 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CTNND1O60716 968 aaKnown RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 GH2P01242 217 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 AKR1B1P15121 316 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CHMLP26374 656 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 YBX1P67809 324 aaKnown RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 SPP2Q13103 211 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CRY1Q16526 586 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CCL15Q16663 113 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CERKLQ49MI3 558 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 TM4SF20Q53R12 229 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 RNF187Q5TA31 235 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 STEAP3Q658P3 488 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 TMED8Q6PL24 325 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 OTOP3Q7RTS5 596 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 ERO1BQ86YB8 467 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CERS3Q8IU89 383 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 PPM1KQ8N3J5 372 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 BRI3BPQ8WY22 251 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CHMP4CQ96CF2 233 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 TSPAN17Q96FV3 270 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 LIN37Q96GY3 246 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 KCNJ15Q99712 375 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 JAM3Q9BX67 310 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CELF4Q9BZC1 486 aaKnown RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 ZNF552Q9H707 407 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 SLC6A20Q9NP91 592 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CATSPERZQ9NTU4 200 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 RNF186Q9NXI6 227 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 HERC5Q9UII4 1024 aaKnown RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 TNPO3Q9Y5L0 923 aaKnown RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 MYH8P13535 1937 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 CCDC171Q6TFL3 1326 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 PCNTO95613 3336 aa8.77□□□□□ -1.01
UBE2B-204ENST00000504431 COL2A1P02458 1487 aaPredicted RBP8.77□□□□□ -1.01
UBE2B-204ENST00000504431 ZC3H12DA2A288 527 aaKnown RBP8.76□□□□□ -1.01
UBE2B-204ENST00000504431 LRRC10BA6NIK2 292 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 PEX10O60683 326 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 FGAP02671 866 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 SRGAP2CP0DJJ0 459 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 HSPD1P10809 573 aaKnown RBP8.76□□□□□ -1.01
UBE2B-204ENST00000504431 GUCY1A2P33402 732 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 LBX1P52954 281 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 GABPAQ06546 454 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 PPARAQ07869 468 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 SEPT2Q15019 361 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 ABCB5Q2M3G0 1257 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 PLEKHN1Q494U1 663 aaPredicted RBP8.76□□□□□ -1.01
UBE2B-204ENST00000504431 FAM47AQ5JRC9 791 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 ZCCHC8Q6NZY4 707 aaKnown RBP8.76□□□□□ -1.01
UBE2B-204ENST00000504431 TATDN1Q6P1N9 297 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 GADL1Q6ZQY3 521 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 ZNF605Q86T29 641 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 LRRTM3Q86VH5 581 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 DHX37Q8IY37 1157 aaKnown RBP8.76□□□□□ -1.01
UBE2B-204ENST00000504431 FAM43AQ8N2R8 423 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 NAPBQ9H115 298 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 NSUN3Q9H649 340 aaKnown RBP8.76□□□□□ -1.01
UBE2B-204ENST00000504431 KLHL14Q9P2G3 628 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 ZBTB21Q9ULJ3 1066 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 AFG3L2Q9Y4W6 797 aa8.76□□□□□ -1.01
UBE2B-204ENST00000504431 CASP8AP2Q9UKL3 1982 aa8.75□□□□□ -1.01
UBE2B-204ENST00000504431 CCDC66A2RUB6 948 aa8.75□□□□□ -1.01
UBE2B-204ENST00000504431 ZBTB48P10074 688 aaPredicted RBP8.75□□□□□ -1.01
UBE2B-204ENST00000504431 GNAT2P19087 354 aa8.75□□□□□ -1.01
UBE2B-204ENST00000504431 SDHBP21912 280 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms