RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SERPINF1P36955 418 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 TMEM132BQ14DG7 1078 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 ACAP1Q15027 740 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 ANKRD39Q53RE8 183 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 FBXO47Q5MNV8 452 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 KDELC1Q6UW63 502 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 MIGA1Q8NAN2 632 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 RUBCNQ92622 972 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 COPS5Q92905 334 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 AK8Q96MA6 479 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 GSDMAQ96QA5 445 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 ORAI2Q96SN7 254 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 HEPHQ9BQS7 1158 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 DECR2Q9NUI1 292 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 IGSF9Q9P2J2 1179 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 SLC39A10Q9ULF5 831 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 BAG2O95816 211 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 GLI1P08151 1106 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 CYP2A6P11509 494 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 GAP43P17677 238 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 AOAHP28039 575 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 STIP1P31948 543 aaKnown RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 RGS2P41220 211 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 TTLL4Q14679 1199 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 POLD3Q15054 466 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 PRR16Q569H4 304 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 PIWIL3Q7Z3Z3 882 aaKnown RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ZBTB44Q8NCP5 570 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 SPATA18Q8TC71 538 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ARHGEF2Q92974 986 aaKnown RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ZNF566Q969W8 418 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 TREX2Q9BQ50 279 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 DSCC1Q9BVC3 393 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 MKNK2Q9HBH9 465 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ADAM30Q9UKF2 790 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ATAD2BQ9ULI0 1458 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 TTLL8A6PVC2 850 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 GPR25O00155 361 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 FMO6PO60774 539 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 SMPD2O60906 423 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 BEST1O76090 585 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 AMY2AP04746 511 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ALOX12P18054 663 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 AMY2BP19961 511 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ADH7P40394 386 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 TLE2Q04725 743 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 COASYQ13057 564 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ADAM9Q13443 819 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 TRIM25Q14258 630 aaKnown RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 PTK2BQ14289 1009 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 FSCN1Q16658 493 aaKnown RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ZBTB41Q5SVQ8 909 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 GPR139Q6DWJ6 353 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 DCLRE1AQ6PJP8 1040 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ZNF610Q8N9Z0 462 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 MARCH10Q8NA82 808 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 SPC24Q8NBT2 197 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ZMIZ2Q8NF64 920 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 CEP70Q8NHQ1 597 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 NPLOC4Q8TAT6 608 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 CUL5Q93034 780 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 LPIN3Q9BQK8 851 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 AP5M1Q9H0R1 490 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 HPF1Q9NWY4 346 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 TMEM160Q9NX00 188 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 INO80B-WBP1J3KQ70 363 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 MTHFRP42898 656 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 CTSKP43235 329 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 C21orf58P58505 322 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 FMO1Q01740 532 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 FAPQ12884 760 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ANKRD1Q15327 319 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 BMP2KLQ5H9B9 411 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 CPNE8Q86YQ8 564 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 MRPL41Q8IXM3 137 aaKnown RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 ADGRG2Q8IZP9 1017 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 TSPEARQ8WU66 669 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 BOCQ9BWV1 1114 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 FAM129AQ9BZQ8 928 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 C2orf40Q9H1Z8 148 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 EPS15L1Q9UBC2 864 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 MAN2B2Q9Y2E5 1009 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 STXBP5LQ9Y2K9 1186 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 PCDHB1Q9Y5F3 818 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 PCDHGC4Q9Y5F7 938 aa5.76□□□□□ -1.49
NIPBL-204ENST00000504430 COL17A1Q9UMD9 1497 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-204ENST00000504430 K7EPI3 171 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 PIP5K1BO14986 540 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 RIPK2O43353 540 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 COBLO75128 1261 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 HOXD8P13378 290 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 EEF1GP26641 437 aaKnown RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 ABCD3P28288 659 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 RGS3P49796 1198 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 PHC1P78364 1004 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 LRRC74AQ0VAA2 488 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SLC14A1Q13336 389 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 ARHGAP11AQ6P4F7 1023 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms