RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 SPTBN2O15020 2390 aa9.93□□□□□ -0.82
NR1I3-219ENST00000504010 TTC3P53804 2025 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 MAP1BP46821 2468 aaKnown RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 OTOGLQ3ZCN5 2332 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 MED19A0JLT2 244 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 FRMD3A2A2Y4 597 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 ANKRD63C9JTQ0 380 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 ERLIN2O94905 339 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 NPTXRO95502 500 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 SRGAP2BP0DMP2 458 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 MAPTP10636 758 aaKnown RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 ARF4P18085 180 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 GATMP50440 423 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 SMTNP53814 917 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 OSTNP61366 133 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 STK4Q13043 487 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 FAM26FQ5R3K3 315 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 L1TD1Q5T7N2 865 aaKnown RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 CDCA2Q69YH5 1023 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 ASTLQ6HA08 431 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 SRGAP1Q7Z6B7 1085 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 TMEM130Q8N3G9 435 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 KIAA0895Q8NCT3 520 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 NOC3LQ8WTT2 800 aaKnown RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 LPPQ93052 612 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 SMARCE1Q969G3 411 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 BICD1Q96G01 975 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 TIGD1Q96MW7 591 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 EIF2AQ9BY44 585 aaKnown RBP9.92□□□□□ -0.82
NR1I3-219ENST00000504010 LRRC27Q9C0I9 530 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 ARHGAP28Q9P2N2 729 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 SORCS3Q9UPU3 1222 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 NR2E1Q9Y466 385 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 HES2Q9Y543 173 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 USP24Q9UPU5 2620 aa9.92□□□□□ -0.82
NR1I3-219ENST00000504010 MEIS3P2A8K0S8 358 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 ENPP3O14638 875 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 GPR182O15218 404 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 KRT37O76014 449 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 GLP2RO95838 553 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 GAP43P17677 238 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 SFPQP23246 707 aaKnown RBP eCLIP9.91□□□□□ -0.82
NR1I3-219ENST00000504010 HOXA11P31270 313 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-219ENST00000504010 HOXD13P35453 343 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 MATR3P43243 847 aaKnown RBP eCLIP9.91□□□□□ -0.82
NR1I3-219ENST00000504010 NRIP1P48552 1158 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 PRPF4BQ13523 1007 aaKnown RBP9.91□□□□□ -0.82
NR1I3-219ENST00000504010 DSC3Q14574 896 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 MAPK6Q16659 721 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 UBXN11Q5T124 520 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 TWF2Q6IBS0 349 aaKnown RBP9.91□□□□□ -0.82
NR1I3-219ENST00000504010 KANK3Q6NY19 840 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 SLC39A4Q6P5W5 647 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 ZNF720Q7Z2F6 126 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 TMEM105Q8N8V8 129 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 CEP120Q8N960 986 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 ZSWIM2Q8NEG5 633 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 SPPL3Q8TCT6 385 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 SPIRE2Q8WWL2 714 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 ZNF689Q96CS4 500 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-219ENST00000504010 RMDN1Q96DB5 314 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 HAPLN2Q9GZV7 340 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 C2orf40Q9H1Z8 148 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 CXCL16Q9H2A7 254 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 FZD8Q9H461 694 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 PCIF1Q9H4Z3 704 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 TLE6Q9H808 572 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 ANKFY1Q9P2R3 1169 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 BARX2Q9UMQ3 279 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-219ENST00000504010 TBX20Q9UMR3 447 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 MYO10Q9HD67 2058 aa9.91□□□□□ -0.82
NR1I3-219ENST00000504010 PHLPP2Q6ZVD8 1323 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 PVALEFA0A1B0GWK0 134 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 GOLGA8IPA6NC78 632 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 GOLGA8JA6NMD2 632 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 ACKR2O00590 384 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 CLIC2O15247 247 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 PDGFBP01127 241 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-219ENST00000504010 FGFR1P11362 822 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 BMP6P22004 513 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 AKAP5P24588 427 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 UBE3AQ05086 875 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 EHHADHQ08426 723 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 STRN3Q13033 797 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
NR1I3-219ENST00000504010 ZBTB41Q5SVQ8 909 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 ATF7IP2Q5U623 682 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 KLHL10Q6JEL2 608 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 PDE12Q6L8Q7 609 aaKnown RBP9.9□□□□□ -0.82
NR1I3-219ENST00000504010 CNNM4Q6P4Q7 775 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 TMEM184AQ6ZMB5 413 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 CMTR2Q8IYT2 770 aaKnown RBP9.9□□□□□ -0.82
NR1I3-219ENST00000504010 SYCP3Q8IZU3 236 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 KREMEN2Q8NCW0 462 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 SCFD1Q8WVM8 642 aa9.9□□□□□ -0.82
NR1I3-219ENST00000504010 ACO2Q99798 780 aaKnown RBP9.9□□□□□ -0.82
NR1I3-219ENST00000504010 NTPCRQ9BSD7 190 aaKnown RBP9.9□□□□□ -0.82
NR1I3-219ENST00000504010 TMEM134Q9H6X4 195 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms