RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 LUC7L2Q9Y383 392 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 COQ4Q9Y3A0 265 aa7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 REXO2Q9Y3B8 237 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-203ENST00000503464 P4HA2O15460 535 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 ARHGAP6O43182 974 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 STX10O60499 249 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 LDHAP00338 332 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 CHRNA1P02708 482 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 C4BPAP04003 597 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 CXCL8P10145 99 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 DLATP10515 647 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 MCF2P10911 925 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 GNAT1P11488 350 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 EIF4BP23588 611 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 GTF2H1P32780 548 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 SCN1AP35498 2009 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 MNX1P50219 401 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 CRYBB1P53674 252 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 MRPS6P82932 125 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 ITGA7Q13683 1181 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 SCN5AQ14524 2016 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 ASTE1Q2TB18 679 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 ZACNQ401N2 412 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 FAM47CQ5HY64 1035 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 UBXN11Q5T124 520 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 TAF2Q6P1X5 1199 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 TRAF7Q6Q0C0 670 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 RRAGAQ7L523 313 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 RNF180Q86T96 592 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 RPAINQ86UA6 219 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 FAM228AQ86W67 206 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 THNSL1Q8IYQ7 743 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 CCAR2Q8N163 923 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 CXorf38Q8TB03 319 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 KAT5Q92993 513 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 IQCDQ96DY2 449 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 KREMEN1Q96MU8 473 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 SCLT1Q96NL6 688 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 DESI2Q9BSY9 194 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 EIF2AQ9BY44 585 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 CELF4Q9BZC1 486 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 GCOM2Q9BZD3 368 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 EDEM3Q9BZQ6 932 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 ARHGAP20Q9P2F6 1191 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 FBXL5Q9UKA1 691 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 PLAGL2Q9UPG8 496 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 PHF24Q9UPV7 400 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 GINS2Q9Y248 185 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 NOC2LQ9Y3T9 749 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 CDY2AQ9Y6F7 541 aa7.48□□□□□ -1.21
TOPBP1-203ENST00000503464 MOXD2PA6NHM9 499 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 F8VZ95 297 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 ZNF263O14978 683 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 B4GALT4O60513 344 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 N4BP1O75113 896 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 ERLIN2O94905 339 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 NPTXRO95502 500 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 MYCP01106 439 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 NFICP08651 508 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 TPM1P09493 284 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 CTSHP09668 335 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 STAG3L1P0CL83 205 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 HSPA8P11142 646 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 CCL5P13501 91 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 MATR3P43243 847 aaKnown RBP eCLIP7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 OSTNP61366 133 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 CDK17Q00537 523 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 CDC42EP1Q00587 391 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 ARHGEF6Q15052 776 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 PTGISQ16647 500 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 SLC10A6Q3KNW5 377 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 KRT39Q6A163 491 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 CATSPER4Q7RTX7 472 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 IRF2BP2Q7Z5L9 587 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 REXO1L1PQ8IX06 675 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 NME8Q8N427 588 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 ACRBPQ8NEB7 543 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 HELQQ8TDG4 1101 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 PPP1R13BQ96KQ4 1090 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 TCHPQ9BT92 498 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 PI4K2AQ9BTU6 479 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 BEGAINQ9BUH8 593 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 MTMR12Q9C0I1 747 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 AGO3Q9H9G7 860 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 APOBEC3GQ9HC16 384 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 AIPL1Q9NZN9 384 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 APEX2Q9UBZ4 518 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 DNAJC12Q9UKB3 198 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 TRPV2Q9Y5S1 764 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 UMODL1Q5DID0 1318 aa7.47□□□□□ -1.21
TOPBP1-203ENST00000503464 LACTBL1A8MY62 500 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 DNM1LO00429 736 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 FANCGO15287 622 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 CABYRO75952 493 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 ABL1P00519 1130 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 HLA-DRAP01903 254 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 CLTAP09496 248 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms