RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CNTN3Q9P232 1028 aa19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 PRG3Q9Y2Y8 225 aaPredicted RBP19.9■□□□□ 0.78
PDLIM7-209ENST00000503346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 TISP43B9A030 160 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 EIF3DO15371 548 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 KLRC4O43908 158 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 PRPF6O94906 941 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 ADSSP30520 456 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 COL19A1Q14993 1142 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 SKIV2LQ15477 1246 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 SLC10A6Q3KNW5 377 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 GLRA4Q5JXX5 417 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 EPM2AIP1Q7L775 607 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 FMR1NBQ8N0W7 255 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 MICAL1Q8TDZ2 1067 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 PPP2R3CQ969Q6 453 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 ZMAT2Q96NC0 199 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 COLEC11Q9BWP8 271 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 VN1R3Q9BXE9 311 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 IKZF4Q9H2S9 585 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 PLEKHA5Q9HAU0 1116 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 PCDHGC5Q9Y5F6 944 aa19.89■□□□□ 0.77
PDLIM7-209ENST00000503346 TCHHQ07283 1943 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 EFEMP2O95967 443 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 POSTNQ15063 836 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 ZBTB41Q5SVQ8 909 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 TMC7Q7Z402 723 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 ZNF507Q8TCN5 953 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 ZBP1Q9H171 429 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 PRDM6Q9NQX0 595 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 ENTPD7Q9NQZ7 604 aa19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 CPSF3Q9UKF6 684 aaKnown RBP19.88■□□□□ 0.77
PDLIM7-209ENST00000503346 UBE4BO95155 1302 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 TTC26A0AVF1 554 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 CASTOR2A6NHX0 329 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 NCK2O43639 380 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 ADRB2P07550 413 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 CXCL8P10145 99 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 CTSAP10619 480 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 TNFSF9P41273 254 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 POU5F1Q01860 360 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 HYAL1Q12794 435 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 HSP90AA2PQ14568 343 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 PLPP4Q5VZY2 271 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 ADGRD2Q7Z7M1 963 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 RNF168Q8IYW5 571 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 SYCP3Q8IZU3 236 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 VPS52Q8N1B4 723 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 TMEM87AQ8NBN3 555 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 ENGASEQ8NFI3 743 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 POMGNT1Q8WZA1 660 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 UROC1Q96N76 676 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 PAAF1Q9BRP4 392 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 SLC38A7Q9NVC3 462 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 AGO2Q9UKV8 859 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 COG5Q9UP83 839 aa19.87■□□□□ 0.77
PDLIM7-209ENST00000503346 PLXNA4Q9HCM2 1894 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 F8W810 466 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 GARTP22102 1010 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 HOXD13P35453 343 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 FAM160A1Q05DH4 1040 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 DPYDQ12882 1025 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 SNW1Q13573 536 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 SMC1AQ14683 1233 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 BMS1Q14692 1282 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 ENOX2Q16206 610 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 BMT2Q1RMZ1 405 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 KMT5BQ4FZB7 885 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 KANK3Q6NY19 840 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 MRPL43Q8N983 215 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 SCFD1Q8WVM8 642 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 HLA-CQ95604 372 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 CCDC34Q96HJ3 373 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 CDCA3Q99618 268 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 RPF1Q9H9Y2 349 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 EXOC1Q9NV70 894 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 THEGQ9P2T0 379 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 CACNG4Q9UBN1 327 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 ADAM28Q9UKQ2 775 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 IRAK3Q9Y616 596 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 PRUNE2Q8WUY3 3088 aa19.86■□□□□ 0.77
PDLIM7-209ENST00000503346 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 HIDE1A8MVS5 230 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 TMEM189-UBE2V1I3L0A0 370 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 SOD2P04179 222 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 RPN1P04843 607 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 PRR29P0C7W0 189 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 PPP2R3AQ06190 1150 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 SOX4Q06945 474 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 PSMD2Q13200 908 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 CTC1Q2NKJ3 1217 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 CD302Q8IX05 232 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 RABGGTAQ92696 567 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 PABPC5Q96DU9 382 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 TSPAN18Q96SJ8 248 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 HERC2P3Q9BVR0 1158 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 SLC39A2Q9NP94 309 aa19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-209ENST00000503346 REV3LO60673 3130 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms